KEGG T01011: 594953

Xenopus tropicalis (western clawed frog): 594953

Entry

594953 CDS T01011

Gene name

hdac1, HD1, gon-10, hdac1-b, rpd3, rpd3l1

Definition

histone deacetylase 1 (EC:3.5.1.98)

Orthology

K06067

histone deacetylase 1/2 [EC:3.5.1.98]

Organism

xtr Xenopus tropicalis (western clawed frog)

Pathway

xtr04110	Cell cycle
xtr04330	Notch signaling pathway

Class

Environmental Information Processing; Signal transduction; Notch signaling pathway [PATH:xtr04330]
Cellular Processes; Cell growth and death; Cell cycle [PATH:xtr04110]

SSDB

Motif

Pfam:

Hist_deacetyl

Other DBs

NCBI-GI:

NCBI-GeneID:

Xenbase:

UniProt:

Position

AA seq 480 aa
MALSQGTKKKVCYYYDGDVGNYYYGQGHPIKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
SVKLNKQQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFIKTFNLPLLMLGG
GGYTIRNVARCWTYETAVALDSEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDSVHDDSGEEDEEDPDKRISIRSSDKRIACDEEF
SDSEDEGEGGRRNVASFKKVKRVKTEEEKDGEEKKDVKEEEKPKDEKTDSKRVKEETKSA

NT seq 1443 nt +upstreamnt +downstreamnt
atggcgctgagtcaaggaacaaagaagaaagtgtgctattactatgatggtgatgttgga
aattattattatggacaggggcatcccataaaacctcatagaattcgtatgacacacaac
ctgctgctgaactatggactttaccggaaaatggagatctatagaccccacaaagccagt
gcagaagagatgacaaagtatcacagtgatgattatataaaattcctgcgctccatacga
ccagacaatatgtccgaatacagtaaacagatgcagagatttaatgttggtgaggactgt
ccagtgtttgatggcttgtttgaattctgccaactctccacggggggctctgtagcaagc
tctgttaaactaaacaaacaacagacggacatttcagtaaactggtctggtggccttcat
catgccaagaaatctgaggcatctggtttttgttatgtcaacgatattgtccttgccatc
ctggaactattgaagtatcaccagagagttctgtatattgatatagacattcaccacggt
gatggtgtggaggaggccttttacacaactgatagagttatgacagtatccttccacaag
tatggagagtattttcctggaactggtgatctgagagatattggtgcagggaaaggcaaa
tattatgctgtgaattatcccttacgggatggaattgatgatgagtcctatgaagcaatt
tttaaaccagtaatgtctaaagttatggagatgtaccagcccagtgcagtggtcctacag
tgtggagcagattccttatccggggatagacttggatgtttcaatttgaccatcaaagga
catgccaagtgtgtggagttcataaagacctttaacttgccactgcttatgctaggaggt
ggaggttacactatcaggaatgtggctcgttgctggacatatgaaacagctgtggctctg
gactctgagatccctaatgagcttccatacaatgattattttgaatattttgggccagac
ttcaagcttcatatcagtccatccaacatgaccaatcagaacactaatgaatatctggag
aaaatcaagcagcgcctttttgagaacttgcgcatgcttcctcatgctccaggagtccag
atgcaagccatcccagaggactctgtacatgatgacagtggtgaagaagatgaggaagat
cctgacaagcgcatttccattcggtcatcggataaaaggattgcgtgtgatgaggagttc
tctgattctgaagatgaaggggaaggaggtcgcagaaacgtggccagtttcaagaaagta
aaacgggttaaaacagaggaggaaaaggatggagaagaaaagaaagatgttaaagaagag
gagaaacctaaagatgagaagacagacagcaaacgggtaaaagaagagaccaaatctgcc
tga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UniGene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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