KEGG   Xenopus tropicalis (western clawed frog): 780036Help
Entry
780036            CDS       T01011                                 

Gene name
usp1, ubp
Definition
ubiquitin specific peptidase 1 (EC:3.1.2.15)
Orthology
K11832  
ubiquitin carboxyl-terminal hydrolase 1 [EC:3.1.2.15]
Organism
xtr  Xenopus tropicalis (western clawed frog)
Pathway
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 Genetic Information Processing
  Replication and repair
   03460 Fanconi anemia pathway
    780036 (usp1)
Enzymes [BR:xtr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.2  Thioester hydrolases
    3.1.2.15  ubiquitin thiolesterase
     780036 (usp1)
Peptidases [BR:xtr01002]
 Cysteine Peptidases
  Family C19: ubiquitin-specific protease family
   780036 (usp1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Xenbase: 
UniProt: 
Position
Un
AA seq 770 aa AA seqDB search
MPGVTHCESQTVLSKSSPPRRNRLSLRFFQKKETKRALEFTETSATTESQNDEEKESEIS
DQVVPTPQLSPPSCCVKKESLIPFVGLNNLGNTCYLNSILQVLCYCPGFKNGIKLLSEII
SKKVENLSKEREQTQDKDTVKHELPASYEVVCSLSSLIHSMEHLQITFLSNPENYDSELA
AQPRRLLNTLREVNPMYEGYLQHDAQEVLQCILGNIQEACQVMKKEMLINSQANDSIKNE
QDTAKLETESKGLNGGDIETVNGSSAEITELETNENGKRKSDNEAGNVKKRTKLTKEPSA
EEQRLTRSKRKSLPEKQDKRTDAPLKSDSGNSNNSQKKSKLGLNWLKSGKQPSILSKFCS
LSKQSDSSSKCSETQSIKSTEKISERKKSKENGLGIFENTKKGEDTETLSGNVESSGFEL
VEKMFQGKLVLRTRCLECESFTERREDFQDISVPVLESEPPKLEDSSDISPDPRLETKTL
RWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFDKIPDIVTIHLKCFSANSSEFDCF
GGLSKVNTALLTPLNLSLEEWSTNQTKDLYGLFAVVMHSGVTISSGHYTAYVRIPEISDL
ERDHMKALVDHKDVLQAEPLNEEEARMSDANYDDGEVSFRVNGCVPSASKVSKKQTDTVS
LLGGQKSKPDFQQLPNKTAKSETVLNSFGDKSYSASFSVDLQCDKSDKRDCKSANSTFSF
LESLKEYLGKWLLFDDSEVKVTEEKDFMTAISPNTLSTSTPYLLFYKKLI
NT seq 2313 nt NT seq  +upstreamnt  +downstreamnt
atgccaggagtcactcactgtgaaagccaaacagtcctatccaaaagcagccctccaaga
aggaaccgcttgtctttgcgcttttttcagaagaaagaaaccaaaagggcactggaattt
actgagacatcagcaacaacagagagtcaaaatgatgaggagaaggaatctgagatcagt
gatcaagtcgttccaactcctcagttatcaccgccatcctgctgtgtgaaaaaagaaagt
ctcattccatttgttggtttgaataatcttggtaatacctgctacctcaacagcatactt
caggtattgtgctattgtcctggatttaaaaatggaatcaagcttctgtctgagattatt
tctaagaaggtggaaaatttaagtaaagaaagagagcagacacaggacaaggatactgta
aagcatgagttacctgcaagttatgaagttgtttgcagtttgagttctttgattcattct
atggaacacctacaaataacttttctatcaaacccagaaaattatgattctgaacttgct
gcccaaccaaggagacttcttaacacgctgagggaggtaaatcctatgtatgaaggctat
ctacagcatgatgcacaagaagttttgcagtgtattttgggaaatattcaagaggcttgt
caggttatgaaaaaggaaatgctgataaactcacaggcgaatgattccattaagaatgag
caggacactgctaagttggaaactgagagcaaaggattaaatggtggtgacatagagact
gtaaatggcagctctgctgaaataactgaattggagacaaatgaaaatggcaaaaggaaa
agtgataacgaggctggaaatgtaaagaaaaggaccaaattaacaaaagaaccatcagca
gaagaacagagattaaccagatctaaaaggaagtcacttccagaaaaacaggataaaaga
actgatgccccccttaagagtgacagtggaaattcaaataattcacagaaaaaatcaaag
ctagggttaaactggctgaaatctggtaaacaacctagcatattatctaagttttgtagc
ttgagtaaacagtcagactcttcatccaaatgctctgaaacacaaagcataaaatccact
gaaaaaatatctgaaagaaaaaaatccaaagaaaatggcctcggcatctttgaaaacacc
aaaaagggagaagatacagaaactctttcaggaaatgtagaatcaagtggttttgaattg
gtggaaaaaatgtttcaagggaagctggtgttgcgaacccgctgtctggaatgtgagtct
ttcacagagaggagagaagattttcaggatatcagtgtgcctgttctagaaagtgaacca
ccaaaactggaggactcctctgacatttctcctgacccaaggcttgaaacaaagacttta
agatgggctatatcccagtttgcatcagtagagagaattgttggagaggacaaatatttc
tgcgaaaactgccatcattacaccgaagcagaaagaagccttctttttgacaaaatccca
gacattgtgacaattcatctgaaatgcttttctgcaaatagctctgaatttgattgcttt
ggtggtctttccaaagtaaacacagcattgttgactccgctgaatttgtctcttgaggaa
tggagtacaaatcaaaccaaagacctttatgggctatttgcagtggtaatgcacagcgga
gttactataagcagtggacactataccgcttatgtacgaattccagagataagtgatctt
gaaagagaccatatgaaagcccttgttgaccacaaggatgttctacaagctgagccatta
aatgaggaagaggcacgcatgagtgatgctaattatgatgatggagaagtatcatttaga
gtgaatggctgtgtaccatcagcttccaaagtgagcaaaaagcaaactgatacagtaagc
cttttaggaggacagaaaagtaaacctgactttcagcagttaccaaacaaaactgctaaa
tcggaaactgttttaaactcctttggggataaaagttacagtgcaagctttagtgtagac
cttcagtgtgacaagtcagacaagagggactgcaaatctgccaattcaacattttctttt
ttagaaagcctgaaagaatatttaggaaaatggcttctttttgatgattcagaagtaaaa
gtcacagaagaaaaagacttcatgactgctatttccccaaacacactttcaacgtccact
ccttatttgctcttctacaagaaattaatttaa

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