KEGG   Xenopus tropicalis (western clawed frog): 780130Help
Entry
780130            CDS       T01011                                 

Gene name
thbs4
Definition
thrombospondin 4
Orthology
K04659  
thrombospondin 2/3/4/5
Organism
xtr  Xenopus tropicalis (western clawed frog)
Pathway
Phagosome
Focal adhesion
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:xtr00001]
 Environmental Information Processing
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    780130 (thbs4)
 Cellular Processes
  Transport and catabolism
   04145 Phagosome
    780130 (thbs4)
  Cellular commiunity
   04510 Focal adhesion
    780130 (thbs4)
Exosome [BR:xtr04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   780130 (thbs4)
  Exosomal proteins of colorectal cancer cells
   780130 (thbs4)
  Exosomal proteins of bladder cancer cells
   780130 (thbs4)
Heparan sulfate/heparin binding proteins [BR:xtr00536]
 Extracellular matrix molecules (General comment) Storage depot, cell adhesion and motility, ECM/barrier formation
  780130 (thbs4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Xenbase: 
UniProt: 
Position
Un
AA seq 955 aa AA seqDB search
MPRRKGLCLFLQMLLLHLYGVCQAQPNYQVFDLLAASVQRQVTPFLQQALNNPSMNEVYL
LSTFKLQPKATVTLFGLYSTSDNSRFFEFTVMGRLNKASLRYLKSDGKLNSVIFSNIEIA
DGKQHTLLLHLSGLHRGSSSAELYLDCVPVDGVKDLPRPLLGASLNAGSVHLKTLQKRGQ
DSMDELKLVMGGTLSQISSIQECFMQQSEPGQQTGDVSRQLIGQITQMNQLLGELRDVMR
QQVKETMFLRNTISECQACGLGPDYPLPTEAPKRQTTTAPPKPRCDATSCFRGVRCIDTG
TGFQCGPCPEGYTGNGVICTDVDECRLNPCFPGVRCINTSPGFKCENCPPGYTGSTIQGI
GINFAKQNKQVCTDINECENGRNGGCTANSLCTNTMGSFRCGACKPGYVGDQIKGCKTEK
SCRRGQSPCHASAQCSEEKDGDITCTCSVGWAGNGYLCGKDTDIDGYPDEALPCPDKNCK
KDNCVYVPNSGQEDTDRDSIGDACDEDADGDGILNEQDNCVLVANIDQKNSDQDIFGDAC
DNCRLTLNNDQRDTDNDGKGDACDDDMDGDGIKNILDNCQRVPNVDQKDKDGDGVGDACD
SCPDIINPNQSDIDNDLVGDSCDTNQDSDGDGHQDSTDNCPTVINSSQLDTDKDGLGDEC
DDDDDNDGIPDTVPPGPDNCRLVPNPGQEDDNNDGVGDVCEADFDQDTVIDRIDVCPENA
EITLTDFRAYQTVVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEG
TFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKS
GPGEHLRNALWHTGDTNDQVRLLWKDPRNVGWKDKVSYRWFLQHRPQVGYIRARFYEGSE
LVADSGVTVDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQAFQAQQFSS
NT seq 2868 nt NT seq  +upstreamnt  +downstreamnt
atgccaagacgaaaaggcttgtgtctcttcctacagatgttacttcttcacctttatgga
gtatgtcaagcacagccaaattatcaagtatttgatcttctcgccgcatcagttcaaagg
caggtcacccctttccttcaacaagcactgaacaatccttccatgaatgaggtttatctc
ttgtccactttcaaacttcagcccaaggctacggttactctctttggactttattctacc
agtgacaacagcaggttctttgaattcacagttatgggtcgtttaaacaaagcctcttta
cgatacctcaagagtgatgggaagttaaactctgtcatcttcagtaacattgagatagct
gatgggaagcagcatacacttctgctgcacctgagcggcctacaccggggctcaagctct
gctgagctctacttggactgtgttccggtggatggtgtaaaagatctgccccgtccatta
ttaggggcaagcttgaatgcaggatctgtgcatctgaaaactctgcagaaaaggggacag
gattccatggatgaattaaaactggtaatgggaggcaccctgtctcagatatcatcaata
caagaatgttttatgcagcaaagtgagcctgggcagcagacaggcgatgtaagcagacag
ttgattggccagataacccaaatgaatcagctgctgggagagctcagagatgtaatgagg
cagcaggtaaaggagaccatgttcttgagaaacacaatttcagaatgccaggcctgtggc
ttaggtcctgactacccattgccaactgaagctccaaagcgccaaaccaccactgcacct
ccaaagcctcgatgtgatgctacttcctgtttcagaggagtgaggtgcattgacacaggg
accggtttccagtgtgggccatgtcccgaagggtacaccggcaatggtgtcatctgtact
gatgtagatgagtgtcggttaaatccatgtttccctggtgttcgttgcataaacacatcc
ccaggattcaagtgtgagaactgtcctcctgggtacactggatccacaattcaagggatt
ggcattaactttgctaagcaaaataagcaggtttgcacagatatcaatgaatgtgagaat
ggaagaaatggaggatgtactgccaattctctttgcaccaatacaatgggatctttccgc
tgtggagcctgcaaacctggttatgttggggatcaaattaaaggctgcaaaactgaaaaa
agctgccgtcgtggacagagcccatgtcatgcaagtgctcagtgttcagaggaaaaggat
ggagacataacctgcacttgttcagtcggttgggccggcaatggctatctctgtggcaaa
gatactgatattgatggatacccggatgaagcactgccatgcccggataagaactgcaaa
aaggacaactgtgtatatgttcccaactcgggtcaagaagacactgatagagatagcatt
ggagatgcctgtgatgaagatgcagatggagacggcatcctaaatgagcaggataactgt
gtgctggttgccaacatcgatcagaaaaacagtgatcaagatatatttggtgacgcctgc
gacaactgccgcttaaccctcaacaatgatcaaagggacaccgacaatgatgggaaaggg
gatgcttgtgatgatgacatggatggagatggcatcaagaacatcttggataactgccag
agagttcccaatgtggaccagaaggacaaagatggagatggtgttggtgatgcttgtgac
agttgcccggacatcataaatccaaaccagtcggacattgacaatgacctggttggagat
tcctgtgacactaaccaagacagcgatggtgatggccaccaagacagcacagacaactgc
cccaccgtcattaacagctctcagctagacacagacaaggacggcctgggcgatgaatgc
gatgatgatgatgataatgatggaatcccggacactgttcctcccggacctgataactgc
agactggttcccaacccagggcaggaggatgacaataatgatggagtcggagatgtctgt
gaggccgactttgaccaggacactgtcatcgaccgaattgatgtttgccctgaaaatgca
gagatcaccctgacagatttcagagcttatcaaactgtggttttggatccagaaggtgat
gcccaaattgatccaaactggattgttttgaaccagggaatggagattgtacagactatg
aatagtgacccaggactggcagttggttacacagcatttaatggagttgatttcgagggc
acattccacgtgaacaccgtgacggatgatgattatgcgggtttcatctttggctatcag
gacagttcaagcttttacgtggttatgtggaagcagactgagcagacgtactggcaggca
accccctttagagcagttgcagagcctggcatccagctgaaggctgtcaaatctaaatca
ggacctggggaacatctaaggaacgcactgtggcacaccggagacaccaatgaccaagtg
aggctgctttggaaagacccaaggaacgttggctggaaagacaaagtgtcctaccgctgg
ttcctacagcacaggccccaagtaggatacatcagagctagattttatgaaggcagcgag
cttgtggctgactctggcgtcactgtggacactaccatgcgtggaggaagacttggagta
ttctgcttttcacaagaaaacatcatttggtctaatctgaaataccggtgtaacgacaca
atcccagaggatttccaagcatttcaagcacaacagttctccagttaa

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