KEGG   Xenopus tropicalis (tropical clawed frog): 549595
Entry
549595            CDS       T01011                                 
Symbol
pex2
Name
(RefSeq) peroxisome biogenesis factor 2
  KO
K06664  peroxin-2
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    549595 (pex2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xtr04121]
    549595 (pex2)
Ubiquitin system [BR:xtr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Peripheral membrane proteins
    549595 (pex2)
SSDB
Motif
Pfam: Pex2_Pex12 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-C3HC4_4 zf-RING_UBOX zf-RING_2 Prok-RING_4
Other DBs
NCBI-GeneID: 549595
NCBI-ProteinID: NP_001016841
Xenbase: XB-GENE-1016618
UniProt: Q28DK5
Position
6:complement(122564472..122572533)
AA seq 306 aa
MAATENKMEEINPVLRISQLDAIELNKALEQLIWSQFNSCFQGFKPGLLTRFEPEIKAFL
CLFLWRYTIYTKNATVGQAILNMQYKNDLEATKNYRPLNKQQKVWFALFMVGGKWLEERS
FDLFSNHPFGASFQRTKYFLNAISGLLKFGALLNFLIFLQQGKFATLTERLLGIRSVFSR
PQDVRQVGFEYMNREILWHGFAEFLIFLLPLINTQKLKSKLFSWCKPAKGHSLSDPSLAV
ICKECCLCGEWPAMPHTIGCSHVFCYYCIKSNYMADMYFTCPKCSSQVHNLQPLEFKIEI
SEVHTL
NT seq 921 nt   +upstreamnt  +downstreamnt
atggcagcaactgaaaacaaaatggaagagataaatcctgtgttaagaataagtcaactg
gatgctattgaattaaacaaggcattagagcaattaatctggtctcaatttaacagttgt
tttcagggatttaaaccaggacttttgactcgctttgaaccagagattaaagccttttta
tgtcttttcttgtggagatataccatttacaccaagaatgctacagtgggacaggccatt
ttaaatatgcagtacaagaatgacttggaggcaacaaagaattacaggcctttgaataaa
cagcagaaagtttggtttgcactcttcatggttggtggcaaatggctcgaggagagatcc
tttgacctattcagtaatcacccttttggggcttcgtttcagaggacaaaatattttctt
aatgccatatctggtcttctgaagtttggagccctcttaaattttttgatttttctacag
caaggaaagtttgctactctgaccgagcgtcttctagggatacggtctgttttcagcaga
cctcaagatgtccgtcaggttggatttgaatacatgaacagagaaattctgtggcacgga
tttgctgaatttcttatttttcttcttcctctcataaacacgcagaaattaaaatctaag
ttgttttcttggtgtaaacctgctaaaggccacagcctcagtgatccgtctttggctgtc
atttgtaaggaatgttgcctgtgtggagaatggcccgctatgcctcataccattggctgc
tctcatgtcttttgttactactgtataaaaagcaattatatggctgacatgtattttaca
tgcccgaagtgtagctcacaggtgcataatctgcagcccctggaattcaaaattgaaata
tctgaagtgcacaccttgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (30)   

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