KEGG   Yersinia aldovae: AT01_2414
Entry
AT01_2414         CDS       T03605                                 
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
yal  Yersinia aldovae
Pathway
yal03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:yal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AT01_2414 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yal03400]
    AT01_2414 (mutM)
Enzymes [BR:yal01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     AT01_2414 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     AT01_2414 (mutM)
DNA repair and recombination proteins [BR:yal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AT01_2414 (mutM)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS
Other DBs
NCBI-ProteinID: AJJ64745
Position
complement(2609898..2610707)
AA seq 269 aa
MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILALSDQRVLSVQRRAKYLL
IELVTGWIIVHLGMSGSLRILSEETEAAKHDHVDLVISNGKILRYTDPRRFGAWLWAKDL
ETSSVLAHLGPEPLGDEFTADYLFDKSRNKRTVIKQWLMDNKVVVGVGNIYASESLFTAS
ILPERAAGSLTKIEAIQLVATIKAVLLHSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRA
GEPCRRCGHLIEIAKHGQRSTFFCRHCQH
NT seq 810 nt   +upstreamnt  +downstreamnt
atgcctgaattaccagaagttgagaccagccgacgcgggatcgaaccctatcttgtcggt
cagaccattctttatgccgtagtcagaaatgctcgcttacgctggcctgtatccgatgaa
attctggcattgagcgatcaacgggtactaagtgttcagcgccgggcaaagtatttactt
atcgaattggtgaccggctggattatcgtccatctggggatgtcgggcagcttacggatc
ttgtctgaagaaactgaagctgcaaaacatgatcatgtcgatttagtgataagtaatggc
aaaatattgcgttataccgatccacggcgctttggagcctggctatgggcaaaagatctt
gaaaccagtagcgtactcgcccatttagggccggaacccttgggtgatgaatttactgct
gattacctgtttgataaatcacgcaataaacgtactgtgataaaacagtggctgatggat
aacaaagtggtggtcggggtgggtaacatctatgccagtgaatcgcttttcactgcgagt
attttgccagaacgtgctgctggttcgttaaccaaaattgaggccatccaattggtggca
acgataaaagcggtgttattgcactctattgagcaggggggcaccacattacgcgacttt
ttacagtcagatggtaaaccggggtattttgcgcaggagttgcaggtgtacgggcgagca
ggcgagccttgccgccgctgtgggcatttgattgagattgcaaagcatgggcagcgcagc
acgtttttttgccgtcactgccagcattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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