KEGG   Salipiger sp. CCB-MM3: AYJ57_17120
Entry
AYJ57_17120       CDS       T04443                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
yan  Salipiger sp. CCB-MM3
Pathway
yan03030  DNA replication
yan03430  Mismatch repair
yan03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:yan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AYJ57_17120
   03430 Mismatch repair
    AYJ57_17120
   03440 Homologous recombination
    AYJ57_17120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:yan03032]
    AYJ57_17120
   03400 DNA repair and recombination proteins [BR:yan03400]
    AYJ57_17120
Enzymes [BR:yan01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AYJ57_17120
DNA replication proteins [BR:yan03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AYJ57_17120
DNA repair and recombination proteins [BR:yan03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AYJ57_17120
SSDB
Motif
Pfam: DNA_pol3_gamma3 DNA_pol3_delta2 DUF3646 AAA RuvB_N AAA_22 AAA_30 AAA_5 AAA_16 AAA_14 AAA_19 AAA_24 Rad17 AAA_assoc_2 AAA_18 Glyco_tranf_2_5 DUF815 nSTAND3
Other DBs
NCBI-ProteinID: ANT62152
UniProt: A0A1B1PUD4
Position
2:complement(724409..726238)
AA seq 609 aa
MTDDSPKYQVLARKYRPETFADLVGQDAMVRTLKNAFKADRIAQAFIMTGIRGTGKTTTA
RIIAKGMNCVGPDGTGGPTTEPCGQCEHCRAIMEGRHVDVLEMDAASNTGVGDIREIIDS
VHYRAASARYKIYIIDEVHMLSNSAFNALLKTLEEPPAHVKFIFATTEIRKVPVTVLSRC
QRFDLRRIEPEVMIDLLRKIASRESAEITDDALALITRAAEGSARDATSLLDQAISHGAG
ETTADQVRAMLGLADRGRVMDLFEKIMHGDAPGALTELSEQYAEGADPMAVLRDLAELTH
WISVVKITPEAAEDPTVGPDERARGAALAQNLGMRPLTRMWQMLLKALEEVAQAPNAMMA
AEMAVIRLTHVAELPSPEELLRKLQDTPPPPPPGPGGGGYAHAPAGGSPAQGGSTQAYGS
AAQPTHPGPAGPSAISGAMSGAMSGAMSGTSYGNAVPAVAQNNALARYPTFEHVLELIRA
NRDVKLLVEVEGGVRLAAYQPGRIEFTPAAKASPDLAQRLGTALQRFTGARWGVSLVNGC
ETPTIVEKRDAAELALRAEAEQHPLVQAAIAAFPKAKIVEIRTPEAEQQQAAVEALPEVE
DEWDPFEED
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgactgacgacagccccaagtatcaggttctcgcccgcaagtaccgccccgagaccttt
gccgatctcgtcgggcaggatgccatggtgcgcaccctgaaaaacgccttcaaggccgac
cgcatcgcgcaggccttcatcatgaccggcatccgcggcaccgggaagaccaccaccgcc
cggatcatcgccaagggcatgaactgcgtcggccccgacggcaccggcggccccaccaca
gagccctgcggccagtgcgagcattgccgcgcgatcatggaaggccgccatgtggacgtg
ctggagatggacgcggcctccaacaccggcgtcggcgacatccgcgagatcatcgacagc
gtgcactaccgggcggcctcggcgcgctacaagatttacattatcgacgaggtgcacatg
ctctcgaacagcgcgttcaacgcgctgctcaagacgctggaagagccgcccgcgcatgtg
aaattcatcttcgccaccaccgagatccgcaaggtgccggtgacggtgctctcgcgctgc
cagcggttcgatctgcgccgcatcgagcccgaggtgatgatcgacctgctccgcaagatc
gccagccgtgaaagcgccgagatcaccgatgatgcgctggcgctgatcacccgtgccgcc
gaaggctcggcgcgcgacgccacgtccctgctcgatcaggcgatcagccacggcgcgggc
gagaccaccgccgatcaggtccgcgccatgctcggcctcgccgaccgtggccgcgtgatg
gatctcttcgagaagatcatgcatggcgacgcgccgggcgcgctgaccgaactgtccgag
caatatgccgaaggcgccgacccgatggcggtgctgcgcgatctggcagagctgacccat
tggatctcggtggtgaagatcacccccgaggccgccgaggaccccaccgtcggccccgac
gagcgcgcccgcggcgcggcgctggcgcaaaacctcgggatgcgcccgctcacccgcatg
tggcaaatgctgctgaaagcgctcgaagaggtggcgcaggcgcccaacgcgatgatggct
gccgagatggcggtgatccggctgacccatgtggccgagttgccttcgcccgaggaactg
ctgcgcaagctgcaggacacgcccccgccgccgcctccgggccccggcggtggtggctat
gcccatgcgcccgcgggcggctctcccgcgcagggcggcagcacgcaggcctatggcagc
gcggcgcagcccacccatcccggccccgccggccccagtgcgatttccggcgcaatgtcg
ggtgcgatgtccggcgccatgtctggcacgagttacggcaacgccgtccccgccgtggcc
cagaacaatgcactcgcccgctatcccaccttcgagcatgtgctcgagctgatccgcgcc
aaccgcgacgtgaagctgctggtcgaggtcgagggcggcgtgcgccttgccgcctatcag
ccggggcgcatcgagttcacccccgccgccaaggcgtcgcccgatctggcgcagcggctc
ggcaccgcgctgcagcgcttcaccggggcgcgctggggggtctcgctggtcaatggctgc
gagacgccgaccattgtcgagaaacgcgatgccgccgagctggcgctgcgcgcggaggcc
gagcagcacccgctggtgcaagccgccattgccgccttccccaaggccaaaatcgtcgag
atccgcaccccggaggccgagcagcagcaggccgccgtcgaggctctgcccgaggtcgag
gacgaatgggatcccttcgaggaagactga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (43)   

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