KEGG   Yersinia enterocolitica FORC_002: FORC2_3708
Entry
FORC2_3708        CDS       T03890                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
yef  Yersinia enterocolitica FORC_002
Pathway
yef02024  Quorum sensing
yef03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:yef00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FORC2_3708
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FORC2_3708
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:yef03019]
    FORC2_3708
   03036 Chromosome and associated proteins [BR:yef03036]
    FORC2_3708
Messenger RNA biogenesis [BR:yef03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     FORC2_3708
Chromosome and associated proteins [BR:yef03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    FORC2_3708
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AKF39855
UniProt: A0A0E1NDG6
Position
complement(4226351..4226656)
AA seq 101 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNPSGSTNNYHGSNPSAPQQPQQDSDDAE
NT seq 306 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttgcaagatccgttcctgaacgcattgcgtcgtgaacgggtt
ccggtttctatttatttagtgaatggcattaaactgcagggccaagttgagtcttttgat
cagtttgtcattctgttaaaaaacacagtcagccagatggtttataagcacgccatctct
actgtagtgccttctcgcccggtttcgcatcacagcaataacccgagtggtagcactaat
aattatcatggtagtaatccatctgcgccgcaacagccgcagcaggatagcgatgacgct
gaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system