KEGG   Yersinia enterocolitica LC20: LC20_05250
Entry
LC20_05250        CDS       T03179                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
yel  Yersinia enterocolitica LC20
Pathway
yel03030  DNA replication
yel03410  Base excision repair
yel03420  Nucleotide excision repair
yel03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:yel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LC20_05250
   03410 Base excision repair
    LC20_05250
   03420 Nucleotide excision repair
    LC20_05250
   03440 Homologous recombination
    LC20_05250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:yel03032]
    LC20_05250
   03400 DNA repair and recombination proteins [BR:yel03400]
    LC20_05250
Enzymes [BR:yel01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LC20_05250
DNA replication proteins [BR:yel03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LC20_05250
DNA repair and recombination proteins [BR:yel03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     LC20_05250
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LC20_05250
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH HHH_5
Other DBs
NCBI-ProteinID: AHM76501
UniProt: A0A7U4GJ17
Position
complement(4655170..4657962)
AA seq 930 aa
MAQIAENPLILVDGSSYLYRAYHAFPPLTNGSGEPTGAMYGVLNMLRSLLLQYRPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHQMVKAMGLPLLTVSGVEADDVIGT
LAQEAEKAGHAVLISTGDKDMAQLVTPNITLINTMNNAILGPQEVCEKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDALFSNLDKIATLSFRGAKTMSAKLEQNK
DVAYLSYKLATIKTDVELDVTCDELKVSAPDDEQLHQLFSRYEFKRWLADVEAGKWLDGK
KDRPMAQTNNKSFAAVEPAAEVMAVLSQDNYQTILDDVTLNAWIERLKKAEVFAFDTETD
GLDTLSSNLIGLSFAVAPGEAAYLPLAHDYLDAPVQLDRDWVLAQLKPLLEDDKALKVGQ
NLKFDQSMLARYGIELRGIAFDTMLESYVLDSVAGRHDMDSLAERYLNHKTITFEEIAGK
GKNQLTFNQIALEQAGPYAAEDADVTLQLHLVLWPKLQQSEGLKRVFQEIEMPLLPILSR
IERTGVLIDQNILAAHSKELTIRLDELEKQAHELAEEPFNLASPKQLQVILYEKQKLPIL
KKTPGGAASTNEEVLAELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPVSGRVHTSY
HQAVTATGRLSSRDPNLQNIPVRNEEGRRIRQAFIAPAGYRIMAADYSQIELRIMAHLSQ
DKGLLAAFAAGKDIHRATAAEVFGLPLENVTNEQRRSAKAINFGLIYGMSAFGLARQLNI
PRGEAQRYMDLYFERYPGVLEYMERTRKQAADQGYVTTLDGRRLYLPDIHSRNANRRKAA
EREAINAPMQGTAADIIKRAMIAVDTWLQQEPEPLVRVIMQVHDELVFEVHESALESAEQ
KIRELMEQSMQLAVPLKVDVGVGYNWDQAH
NT seq 2793 nt   +upstreamnt  +downstreamnt
atggcccagattgcagaaaacccattgatccttgttgacggttcctcttacctctatcgt
gcataccatgccttcccaccgttaaccaacggcagcggtgagccaacgggggcaatgtat
ggcgtgttgaacatgttgcgcagtctgttgttgcaatatcggccaagccatgtggccgtc
gtttttgatgccaaaggtaaaacattccgtgatgagcttttcgcggaatataagtctcac
cgcccgccgatgccagatgatttacgcgcccaaattgagccgctgcaccagatggttaag
gcgatggggttgcctttattgacggtttccggtgttgaggctgatgatgttatcggtact
ttggcacaagaagcggaaaaggcgggtcatgcagtattaattagtactggtgataaagac
atggcgcaattagttacgccaaatatcactcttattaatacaatgaataatgctatttta
gggccacaggaagtgtgcgaaaaatatggcgttccccccgagctgattattgattttctc
gcgttaatgggggattcctcagataatattccgggcgtaccgggggttggcgagaagacg
gcgcaggctttattgcaaggtttgggcggattggatgcgctatttagtaatttggataaa
attgccacgctaagcttccgcggtgccaaaacaatgtctgccaaattagagcagaataaa
gatgttgcctacctctcctataaactcgccacgattaaaacggatgttgagctggatgtt
acttgtgatgaactgaaagtctcagcaccggatgatgagcagctgcatcaattattcagt
cgttatgaatttaagcgctggctggcggatgtcgaagctggcaaatggctggatggtaaa
aaagaccggccaatggcgcagacgaataataaatcttttgccgccgtagaaccggcagcg
gaagtcatggctgtattatcacaagataattatcaaactatcttggatgacgtcacttta
aacgcgtggattgagcggcttaaaaaagcggaagttttcgcttttgatactgaaactgac
ggccttgatacgctcagcagcaatttaatcggcctctcttttgctgtagcgccgggtgaa
gctgcttatttaccattagcgcatgattatctggatgcacctgtacagctcgatagggat
tgggttttggcccagcttaaacccttactggaagatgataaggccctaaaagttgggcag
aatcttaagtttgaccaaagcatgctggcgcgttacggcattgaactgcgcggtattgct
ttcgataccatgctggaatcttatgttttagacagtgtagccggtcgacacgatatggat
agcttggccgagcgctatctcaatcataaaaccattacttttgaagagatcgccggtaaa
ggtaaaaaccagctgactttcaaccaaattgcgttggaacaagctggcccttatgcggcg
gaagacgcggacgtcaccttacaattgcatttggtgctgtggccgaaactacagcaaagt
gaaggcctaaagcgggttttccaagaaattgagatgcctttactgccgattttgtctcgc
attgagcgcactggggtgctgattgaccagaatatattggcggcccattccaaagaactg
actattcgccttgatgagttggaaaaacaggcgcatgaattggcggaggagccatttaat
ctcgcctcacctaagcaattacaggttattttgtatgaaaaacaaaaattgcctattttg
aagaaaaccccaggcggtgccgcttcaaccaatgaagaggtgctggcagagttggcgttg
gattaccctttgccgaaagtcattcttgaatatcgtggcttggccaagctgaaaagcact
tataccgataaattgccgttgatgattaatcctgtttctgggcgagttcacacttcttat
catcaggccgtcacggcgaccgggcgtttatcttcccgagatcctaacctgcaaaatatt
ccggtgcgaaatgaagaagggcgtcgtatacgccaggcttttattgcgcctgcaggttat
cgcattatggcggcggactattcacagattgagctgcgcattatggcccatttatcgcag
gataaagggctgttggctgcatttgccgccggcaaggatatccaccgcgccacagcggca
gaagtctttggtttgcctctggaaaacgtcacgaatgaacagcgccgcagtgctaaggcg
attaactttggtttgatttatggcatgagcgcatttggtttagcgcgacaattgaatatt
ccgcgcggggaagcacagcgctatatggatctctactttgagcgctaccctggcgtgctg
gaatatatggagcgcacacgtaagcaagccgctgatcaaggttatgtcaccaccctagat
ggccgtcgcctctatctgccagacattcactcacggaatgcaaatcgccgtaaggctgct
gaacgcgaggccatcaatgcgccgatgcaagggactgcggctgatattattaagcgcgca
atgattgcagtagacacgtggttacagcaagaacctgagcctttggtgcgggtaatcatg
caggtacatgatgaattggtatttgaagtgcatgaaagtgcattagaaagtgccgagcag
aaaattcgcgagctgatggaacaaagtatgcaattggccgtgccattaaaggttgatgtc
ggtgtgggttataactgggatcaagctcattag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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