KEGG   Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype O 9): YE105_C3787
Entry
YE105_C3787       CDS       T01480                                 
Name
(GenBank) periplasmic pectate lyase precursor
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
yep  Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9)
Pathway
yep00040  Pentose and glucuronate interconversions
yep01100  Metabolic pathways
yep02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:yep00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    YE105_C3787
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    YE105_C3787
Enzymes [BR:yep01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     YE105_C3787
SSDB
Motif
Pfam: Pectate_lyase_2
Other DBs
NCBI-ProteinID: ADZ44281
Position
complement(4362961..4364679)
AA seq 572 aa
MKKRALFLSMAALATLYIPTGQAADTDRLTVVKQYVDNVLNKASDTYHGDKPSPLLADGV
DPRTGQQLEWIFPDGRRAVLSNFSAQQNLMRVMSGLSQLSGDPRYQKRAEDIVRYHFQNY
QDPSGLLYWGGHRFVDLKTLQPEGPSEKEMVHELKNAYPYYDLMFSVDSDATTRFIRGFW
NAHVYDWRILETSRHGEYGKPMGALWESKFEQQPPFFATKGLSFLNAGNDLIYSASLLYQ
HQQDQGALTWAKRLADQYVLPRDAKTGLGVYQFTQALKREEPTDDADTHSKFGDRAQRQF
GPEFGPTALEGNMMLKGRTSTLYSENALMQLQLGKDLGPQGQDLLKWTVDGLKAFAKYAY
NDQDNTFRPMIANGQDLSNYTLPRDGYYGKKGTVLKPYKAGNEFLISYARAYAIDNDPLL
WKVARGIANDQGLGDIGTAPGKEVKVNIDTTNSDPYALFALLDLYHASQVADYRKLAEKI
GDNIIKTRYIDGFFMASPDRQYADVDAIEPYALLALEASLRNKPQAVAPFLNGAGFTEGA
YRMDDGSARVSTRDNELFLLNVGEKLQPNGRK
NT seq 1719 nt   +upstreamnt  +downstreamnt
atgaaaaaaagagcgttatttttgagtatggcagcgctggcaacgctgtatatacccacc
gggcaggcagcggataccgaccgcctgaccgtggtaaaacagtatgtcgataatgtatta
aacaaggcatccgatacttaccacggtgataagcccagcccgctgctggcggatggtgtt
gacccccgaaccggacagcaattggaatggatattccccgatggccgccgggcagtatta
tcaaacttttcggcacaacaaaatctgatgcgtgtcatgagcggcttgagccaactcagt
ggtgatccgcgctatcagaagcgtgctgaagatattgttcgctatcatttccagaactat
caagacccgagtggcttactgtattggggaggacaccggtttgttgatctgaaaaccctc
caaccagaagggccaagtgaaaaagagatggtgcatgagctgaaaaatgcctatccctac
tatgacctgatgttcagtgtcgacagtgatgccaccacccgctttattcgtggtttttgg
aatgcccatgtttatgattggcgtattctcgaaaccagccgccacggtgaatatggcaaa
ccgatgggcgcactgtgggaaagcaaatttgagcagcagccacctttctttgctaccaag
ggattgagtttccttaatgcggggaatgatctgatttattccgcatccctgctttaccaa
caccagcaagatcagggcgcattaacttgggctaaacgcctggccgatcagtatgttttg
ccgcgtgacgccaaaacgggcctcggtgtttatcagttcacacaagccctgaaacgtgaa
gaacccactgatgatgccgatacccattccaaattcggtgaccgcgctcagcgtcagttt
gggccagagttcggcccgacagcactggaaggcaatatgatgctcaaagggcgcaccagc
accctttattctgaaaatgccttgatgcagttgcaattgggtaaagacttaggtccacag
gggcaggacttgctgaaatggacggtggatggtctgaaagcattcgccaaatatgcctat
aacgatcaagacaataccttccgtccaatgatagccaacgggcaggatttgtcgaattac
accctgccgcgtgatggttattacggcaaaaaagggacagtgctcaaaccatacaaagca
ggtaatgaattcctgatttcttatgcgcgtgcttatgctatcgacaatgacccattactg
tggaaagtggcccgtggtattgccaacgaccaggggctgggtgatatcggtactgcgccg
ggcaaagaagtcaaagtcaatatagacaccaccaacagtgatccttacgccttgtttgct
ttgttggatctctaccatgccagtcaggtggcggattatcgaaaactggcagagaaaatc
ggcgataacatcattaaaacacgttatatcgacggcttcttcatggcctcacctgatcgc
caatatgccgatgttgatgccatagaaccttacgctctgttggctctggaagcgtcattg
cgcaataaaccacaggcagtggcacctttcctcaatggtgcgggtttcacggaaggggct
tatcgaatggatgacggttcagcgcgagtgtcaacccgtgataatgaactgttcttgctc
aatgtgggcgagaagctgcaaccgaacggccgtaaatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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