KEGG   Yersinia enterocolitica WA: CH47_2717
Entry
CH47_2717         CDS       T03643                                 
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
yew  Yersinia enterocolitica WA
Brite
KEGG Orthology (KO) [BR:yew00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:yew03016]
    CH47_2717 (truD)
Enzymes [BR:yew01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     CH47_2717 (truD)
Transfer RNA biogenesis [BR:yew03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    CH47_2717 (truD)
 Prokaryotic type
    CH47_2717 (truD)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AJI83286
UniProt: A0A485DRE7
Position
complement(2907606..2908655)
AA seq 349 aa
MDMDNLTWLHGKPKASGVLKANPEDFVVVEDLGFEPDGEGEHLLVRIRKHGCNTQFVADY
LARFAKIHPRLVSYAGLKDRHAVTEQWFCLHLPGKEAPDLSTFELEGCEVLESVRQKRKL
RIGSLKGNAFTLVLRHITDNQDVEQRLQQIAAHGVPNYFGSQRFGRGGNNLVQARLWANN
EIRVKERSKRSFYLSASRSAMFNLISSDRLAQQQATTVLEGDALQLSGRGSWFVAAADEL
ALLQQRVDAGELNITAPLPGDGELGTQGAALAFEQACLADQTELLALIKRERVEGARRAI
LLKPQNMAWNWWDEVTLELSFWLPAGSFATSVVREIMNQDNADAADIAE
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggatatggacaatctaacctggttgcacggcaagcccaaggcgagtggcgttttaaaa
gccaacccggaagattttgtggtagtggaagatctgggttttgagccggacggtgaaggc
gagcatttattggttcgtatccgcaaacatggctgtaacacccaatttgttgctgattat
ctggcgcgattcgccaaaattcacccacggctggtgagctatgcgggcttgaaagatcgt
cacgcagtcaccgagcagtggttttgtctgcacttgccgggcaaagaagcgccggatctt
tcgactttcgagctggaaggttgtgaagtgctggagtctgtgcggcagaaaagaaagtta
cgtatcggttcattgaaaggcaatgcttttaccttggtattgcgccacataacagacaat
caggacgtagaacaacgcttgcaacagatagccgcgcatggcgtacctaactattttggt
agccagcgatttggccgtggtggcaataatctggtgcaggctcgcttgtgggcgaataat
gaaattcgggtgaaagagcgcagtaaacgcagcttttacttatccgccagccgtagcgcc
atgttcaacctgattagcagtgaccgtttggctcaacagcaggcgacgacggtgctggaa
ggggatgcattacagctctcggggcgcggcagttggtttgttgccgcagctgatgagttg
gccttgttacagcagcgagtcgatgcgggcgaactgaatattacagcgccattgcccggt
gatggtgagctgggcactcaaggcgcagcattagctttcgagcaggcatgtttagcggat
caaaccgagttactggcgctgattaaacgcgaacgtgttgaaggggcacgccgggccatt
ttgctgaaaccgcagaatatggcatggaactggtgggatgaggtcacgttggaactcagc
ttctggttacccgccggtagttttgctaccagtgtcgtgcgcgaaatcatgaatcaggat
aatgccgatgctgcggatattgctgagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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