KEGG   Yersinia frederiksenii: AW19_691
Entry
AW19_691          CDS       T03606                                 
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
yfr  Yersinia frederiksenii
Pathway
yfr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:yfr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    AW19_691 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yfr03400]
    AW19_691 (sbcB)
Enzymes [BR:yfr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     AW19_691 (sbcB)
DNA repair and recombination proteins [BR:yfr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     AW19_691 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AW19_691 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AW19_691 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: AJI88842
Position
complement(727032..728462)
AA seq 476 aa
MSDKNKSPTFYIHDYETFGQRPALDRPAQFAGVRTDLEFNIIEEPLVVYCAPADDYLPQP
EAVMITGITPQHALANGVNEAEFARQIHQAFNVPGTCILGYNNIRFDDEVSRNIFYRNFY
DPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENEDGLPSFKLEHLTKANGVEHLHAH
DAMSDVHATIAMAKLVKQAQPRLFDYLYQHRSKHKINALIDIADMTPLVHVSGMFGAARG
NTSWVAPLAWHPENKNAVIMCDLAGDTSPLLELDSDTLRERLYTRRDKLNAQDAAVPLKL
VHINKCPVLAPAKTLLAENAERLGIDRQRCLQNLQLLRQNPQIREKVVALFAEAEPFAVS
DDVDAQLYNGFFSDADRATMKIILQTEPQNLPALDLTFQDPRLEALLFRFRARNYPNTLT
DSEQQSWLEHRREALNPERVQDYVLQLEQFYNQYEGDKEKLALLKALFDYARDLVS
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgtcagataaaaataagtcaccaacattttacattcacgattatgaaacctttggtcag
cgcccggcgttagacagacccgcgcagtttgccggagtgcgtaccgatttggagttcaat
atcatcgaggaaccattggtggtttactgtgcccccgccgatgactatctgccgcaacca
gaggccgtgatgataaccggcatcaccccgcaacatgccttagccaatggggttaatgaa
gccgagtttgcccgccaaattcatcaagctttcaatgtgcccggcacctgtattctcggc
tacaataatattcgttttgatgatgaagttagccgcaatattttctaccgcaatttctat
gatccctatgcttatagctggcaaggcggtaattcccgttgggacttgctcgatgtcatg
cgcgcttgttatgccctgcgtccagaaggcattgtctggccagaaaacgaagatggctta
cccagctttaaacttgagcatttaactaaagccaatggtgtcgagcacttacatgcccat
gatgcgatgtccgatgtgcacgccaccatcgccatggcaaagttggtcaagcaagcgcaa
ccccggctgtttgattacctctatcagcaccgcagcaaacataaaattaacgcattgatt
gatattgcagatatgacgccactggttcatgtgtctggcatgtttggtgccgcgcggggc
aacaccagttgggttgccccgctagcatggcatcctgagaataaaaatgcggtaattatg
tgcgatttggcgggtgatacgtcgccactattggagctggatagcgatactctgcgtgag
cggctgtatacccgccgcgataaactcaatgctcaagacgcagccgtccccttgaagttg
gtgcacattaataaatgtccggtattggcaccggcgaaaacgctgctggctgagaatgcc
gagcggctggggattgatcgtcagcgctgtctgcaaaacctgcaactattgcggcaaaac
ccgcaaatacgcgaaaaagtggtcgcgttgtttgctgaagcggaaccttttgcagtgtct
gatgatgtagatgcccagctgtataatggatttttcagtgatgctgaccgcgccaccatg
aaaatcattttacaaactgagccacaaaatctacccgcgctcgatctgaccttccaagac
ccacgtttggaagcgctgctatttcgcttccgcgcccgtaattatccgaatactttgacg
gacagtgagcaacagagctggttagagcatcgtcgcgaagcacttaatccagaaagagtg
caagattatgtactgcaactggaacagttttataaccagtatgagggcgataaagagaag
ttggcactactgaaagccctgtttgactatgccagagatctggtgagctga

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