KEGG   Yersinia intermedia: CH53_809
Entry
CH53_809          CDS       T03608                                 
Symbol
ffh
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
yin  Yersinia intermedia
Pathway
yin02024  Quorum sensing
yin03060  Protein export
yin03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:yin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    CH53_809 (ffh)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CH53_809 (ffh)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CH53_809 (ffh)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yin02044]
    CH53_809 (ffh)
Enzymes [BR:yin01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     CH53_809 (ffh)
Secretion system [BR:yin02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   CH53_809 (ffh)
  Eukaryotic Sec-SRP protein
   CH53_809 (ffh)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 cobW AAA_31 AAA_30 AAA_24 KTI12 AAA_33 YqeC APS_kinase VirC1 AAA_19 AAA_14 Fe-ADH TsaE ArsA_ATPase AAA_16 DUF5407 Fe-ADH_2
Other DBs
NCBI-ProteinID: AJJ20402
UniProt: A0A0T9LM30
Position
complement(918795..920156)
AA seq 453 aa
MFENLTDRLSRTLRNISGRGRLTEENIKETLREVRMALLEADVALPVVRDFINRVKERAV
GHEVNKSLTPGQEFVKIVKNELIAAMGEVNNELNLAAQPPAVVLMAGLQGAGKTTSVAKL
GKFLKEKQKKKVLVVSADVYRPAAIKQLETLAQGVDIDFFPSDVQEKPIDIVNRALQQAK
LKFYDVLIVDTAGRLHVDEAMMDEIKQIHAAINPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKSDALEPFHPDRVASRILGMGDV
LSLIEDIESKVDRAQAEKLATKLKKGDGFDLNDFLDQLKQMRNMGGMASMLSKMPGAGQL
PENVKSQMDDKVTVRMEAIINSMTLKERAKPEIIKGSRKRRIATGSGVQVQDVNRLLKQF
DEMQRMMKKMKNGGLAKMMRGMKGMMPPGFPGR
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgtttgagaacttaactgatcgattgtcgcgcacattgcgcaatatcagcggccgtggc
cggctgacagaagaaaatattaaagaaacgctgcgtgaagttcgcatggcgttactggaa
gctgacgtagccctgccggtggttcgtgactttatcaaccgggtaaaagagcgcgctgtc
gggcatgaggtgaataaaagcctcacgccaggccaagaattcgtcaaaatagttaaaaat
gaacttatcgccgccatgggcgaggtcaataacgaactgaatctggccgctcaaccgcca
gcagtggtgttaatggcgggtctgcaaggggcgggtaaaaccaccagtgtggccaaactg
ggtaagttccttaaagaaaaacagaagaaaaaagtgctggttgtgtctgccgacgtgtat
cgccctgcggcgatcaaacagttggagacgctggcacagggtgttgatattgatttcttc
ccgtctgatgtacaagaaaagccgattgatattgttaatcgtgctctgcaacaggcaaaa
ctcaagttttatgatgttctgattgtcgataccgccggtcgcttgcacgtcgatgaagcg
atgatggacgagatcaaacagattcatgccgcgattaatccggttgaaaccttgtttgtt
gtcgatgcaatgaccgggcaggatgctgctaacacggcgaaagcattcaacgaagcgttg
ccgctcaccggtgtggtgctgactaaagttgatggtgatgcccgtggtggtgcggctctg
tctatccgccatattaccggcaagccgatcaaattcttgggcgtgggcgaaaagtctgat
gccctggagccgttccacccggatcgcgtggcttcacgcattctggggatgggcgacgtg
ctgtcgctgattgaagatatcgaaagtaaagttgaccgtgcacaagcggagaaactggcc
accaagctgaaaaaaggtgatggtttcgatctcaacgacttccttgatcagttgaagcaa
atgcgcaatatgggcggtatggccagcatgttgagtaaaatgccgggtgctggtcagttg
ccagaaaacgtgaaatcacagatggacgataaggtgacggttcgtatggaggccatcatc
aattcgatgacgctgaaagaacgtgctaaaccagagatcatcaaaggctcgcgtaagcgc
cgtattgctaccggttctggcgtgcaggtgcaggatgttaaccgcttacttaagcagttt
gatgaaatgcagcgcatgatgaagaaaatgaaaaatggtggcttggctaaaatgatgcgt
ggcatgaagggtatgatgccaccgggtttcccaggccgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (35)   

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