KEGG   Yersinia rochesterensis: CH54_3336
Entry
CH54_3336         CDS       T03609                                 
Name
(GenBank) hypothetical protein
  KO
K11896  type VI secretion system protein ImpG
Organism
ykr  Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:ykr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ykr02044]
    CH54_3336
Secretion system [BR:ykr02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CH54_3336
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: AJJ36684
Position
3647024..3648787
AA seq 587 aa
MKDLTLRYYDAEMRYLRDAAKEFAQTHPDRAAMLDLDKPGTPDPYVERLFEGFAFSMGRL
REKIDDDLPEFTEGLVSMLWPHYLRTIPSLSIVSLTPDVPAMKMAETVPIGMEIYSRPIG
PKNTVCQYRTTREMVLNPLAVSTVVMATEPDGRSVLRLRLACSPQADWSQVDLRRLCFYL
AGEAAVSSALHLALTRRQAALYLRLPNQVDRIKLDGWFSPGGFADQDLLWPKGDSAFSGY
QLLLEYFTFREKFMFVHLNGLETVTLPAGIAWFDIEVVFDCQWQSDLPVRDDALNLHCVP
VVNLFSLEADPLTINGLESEYMLRPRRLQDGHTEIYSVDTVTGSQRTSDATYVPFTSFRH
RGGMQRRHAPERYFHTRVKRGVTGLHDTWLILGGQQWEADRLFTREAVSLKITGTNGQLP
RKALQSTLLDRCEAVLQTPLKVRNLCKPTLPSYPPAEDHFQWRVLSHLGSSYLNLMSSAE
VLRGTLELYNWQGDELNNRRLDAIQQVQHHQTQRFEKGFLLRGIDIEVTLDGNGFTGEGD
IHLFGEMLNRFFALYADIHLFNQLTLIVQPAGKCIRWKENHNQRLPG
NT seq 1764 nt   +upstreamnt  +downstreamnt
atgaaagaccttaccctgcgttattacgatgctgaaatgcgctatctgcgcgatgcagcg
aaagagtttgcccaaactcaccctgatcgggcggcgatgttagatctggataaacccggt
acgcctgacccttacgtcgaacgcctgtttgaaggttttgccttctccatggggcgattg
cgcgaaaaaattgatgacgacctgccggagtttaccgaagggctggtgagcatgctgtgg
ccgcactatctgcgcaccattccttcgctctccattgtctcgctgaccccggatgttccg
gcgatgaaaatggccgaaaccgtgcccatcggtatggaaatctattcccgccccatcggg
ccgaaaaatactgtctgccagtaccgcaccacccgcgagatggtactcaacccgctcgcc
gtctcaaccgtggtgatggcgactgagccggacggccgttcggtgctgcgcctgcgactg
gcatgcagcccacaggctgactggtcgcaggtggacttacgtcgtctctgtttttatctg
gcgggagaggcggcggtcagcagtgcgttacatctggccctcacccggcggcaggccgcg
ctctatttgcgtctgcccaatcaggttgatcggataaaactggatggttggttttcgccc
ggtggctttgcagaccaagacctgctgtggcccaaaggcgacagcgccttcagcggttat
cagctattactggagtatttcactttccgcgagaagtttatgttcgtgcatctgaacggg
ctggaaaccgtgacgctgccggcgggtattgcctggtttgatatcgaagtggtgtttgat
tgtcagtggcaaagtgatctgccggtcagggatgacgcgcttaacctgcattgtgtgccg
gtggttaacctgttctcactggaagcggatccgctgaccatcaatggactggaaagtgag
tatatgctgcgcccgcgccgtttgcaggatgggcacaccgaaatttattccgtggatacg
gtgaccggctcgcagcggacatccgatgccacttatgttccatttaccagttttcgccat
cgcggcgggatgcagcgacgtcatgcgccggaacgctacttccatacccgggtgaaacgg
ggggtgaccgggctgcacgatacctggctgatcctcggcgggcagcagtgggaagcggac
cggctgttcacccgcgaggcggtgtcgctgaaaatcaccggtaccaatggtcagctaccg
cgtaaagcattacaaagcacgctgttggaccgctgcgaagcggtgttacagacgccgctg
aaagtgcgcaatctctgcaagccgacgttaccgtcttatcccccagcggaagatcacttc
cagtggcgggtactgagccacctggggtcaagctacctcaacctgatgagcagcgcggag
gtgctacgcgggacgctggagctgtacaactggcagggggatgaactgaataaccgccgt
cttgatgccattcaacaggtgcagcaccaccagacgcagcggtttgaaaaaggctttctg
ctgcggggtatcgatattgaagtgacactggatggcaacggttttaccggtgaaggcgac
attcatctgtttggcgagatgctcaaccgcttctttgcgctttacgctgacatccatctg
ttcaatcagctcacccttatcgttcagcctgccgggaaatgtatccgatggaaagagaat
cacaatcagcgtctgcccggctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (7)   

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