KEGG   Yersinia rochesterensis: CH54_4051
Entry
CH54_4051         CDS       T03609                                 
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
  KO
K03212  23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
Organism
ykr  Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:ykr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ykr03009]
    CH54_4051 (rumA)
Enzymes [BR:ykr01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.189  23S rRNA (uracil747-C5)-methyltransferase
     CH54_4051 (rumA)
Ribosome biogenesis [BR:ykr03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CH54_4051 (rumA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 MTS Methyltransf_25 Methyltransf_15 Methyltransf_12 Cons_hypoth95 Methyltransf_11 Methyltransf_32 Methyltransf_4
Other DBs
NCBI-ProteinID: AJJ35410
Position
4400456..4401586
AA seq 376 aa
MHCAQYTAGSCRSCQWLDKPYPQQLADKQHHLENLLSGHAVTQCLSPVFGQESAFRNKAK
MVVSGSVERPLLGMLHRDGTPVDLCECPLYPASFAPVFAVLKTFIARAGLTPYNVARKRG
ELKFLLLTESTYSGELMLRFVLRSPTKLAQLQAALPWLQQQLPQLAVISANIQPVHMAIL
EGELEIPLTEQQALPEIFNQVPLFIRPQSFFQTNPQVAASLYATARQWVRELNINSMWDL
FCGVGGFGLHCADTETQLTGIEISAEAIACARQSASQLGLKNVNFAALDSTRFATTEKQV
PQLVLVNPPRRGIGAELCEYLSQMAPEFILYSSCNAETMTKDINLLANYRIERVQLFDMF
PHTAHYEVLSLLTLRP
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgcattgcgcacaatatacggcgggtagctgccgttcctgtcagtggctggataaacct
tatccacaacaactggctgataaacaacatcatttagaaaatctgttatctggtcacgcc
gttactcaatgtctatcgccggttttcgggcaggaaagtgcttttcgtaataaagccaaa
atggtggttagcggcagtgttgagcgcccattattaggaatgttgcaccgcgatggcacc
ccggttgatttatgtgagtgtccactttatcccgccagttttgcgcccgtttttgcagtg
ctgaaaacctttattgcgcgtgcgggcctaacgccttataacgttgcgcgcaagcgcggt
gagcttaaattcctgttattgactgaaagcacttacagtggcgagttaatgctgcgcttt
gtgttgcgctcacccactaaattggcacagctacaggcggccttgccctggttacagcaa
caattacctcaacttgccgttatctcggccaatattcagccggtgcatatggcgattttg
gaaggggagctggaaattccattaactgagcagcaggcgctacccgagatctttaatcaa
gtgccgctgttcatccgcccacaaagttttttccagacaaatccgcaggttgcagcatca
ttgtatgctactgcgcgccaatgggtgcgagagctgaatatcaatagcatgtgggattta
ttctgtggggtagggggttttggtttgcattgtgcagatactgaaacccagcttaccggc
attgaaatcagcgccgaagctattgcctgcgcgcgccagtcagcgagccaattggggtta
aaaaatgtcaattttgccgcgctagattcgacgcgttttgccaccacagaaaagcaagtg
ccgcaattggtgttagtaaatccgccacggcgcggcattggtgccgaactgtgtgaatat
ctcagccaaatggcacccgaatttattctctattcaagctgtaatgccgagacaatgacg
aaagatatcaatttgttagcgaactatcgcattgagagggtgcagttgtttgatatgttt
ccgcataccgcccactatgaagttttatccttacttaccctgcgcccttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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