KEGG   Yarrowia lipolytica: YALI0D01628g
Entry
YALI0D01628g      CDS       T01033                                 
Name
(RefSeq) YALI0D01628p
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
yli  Yarrowia lipolytica
Brite
KEGG Orthology (KO) [BR:yli00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:yli03016]
    YALI0D01628g
Enzymes [BR:yli01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     YALI0D01628g
Transfer RNA biogenesis [BR:yli03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    YALI0D01628g
 Prokaryotic type
    YALI0D01628g
SSDB
Motif
Pfam: TruD DUF1972 Sigma70_ner
Other DBs
NCBI-GeneID: 2910468
NCBI-ProteinID: XP_502295
UniProt: Q6CAL7
Position
D:196682..198631
AA seq 649 aa
MSEVAKKQKTEEGSVVTKVESNEVSETAAPVTAEVKDIGVTEPRVGITEYISPGLAGFRG
ILKQRYSDFMVNEIGLDGQVVHLTDTGAPGAQDRRRERREAERAEEEAKKEKEAEEEEEA
KPKFVVSPENTEKLLNVFSQADIDNMVALFNTGTKMETEKGYDDKETRTAIHQTIREVFE
GKLETKTSADNKFIITLASGNPRYSRTAREKLNKMYGPKKEFVHFSLYKENKETMEAVNL
ISKFLKAKPSQFTYAGTKDKRGVTVQKMTARGISGGVERVKGLNKTLRGMKLGSFAYSDE
HLRLGDLEGNEFIITIREIDGKQSEIDAALTSLKEHGFINYYGMQRFGTFSISTHEVGRH
VLASQWDEVVDMLLRPQELALEESKEARQIWKDTKDAGKALTKMPFRCAAECAILKALKN
DPNSLNAVNRIPRNLRIMYGHAYQSYVWNAVVSKRVAMGLKVVEGDLVIDDNANKDGKIE
DSNEESGQDLKIDPFTRARPITAEEIASNKFSIYDIVLPTPGHDVIYPTHLEEEYKNIMA
KDNLDPHKMARTIRDYSLAGGYRHVFAKPSGVEWFFEKYSNPVEQFVNTDLDMLEKGVDR
YTHCDEQDGDKLGLVLKLQLGSAQYATMALREVMKVDTSRRSDSFNVRV
NT seq 1950 nt   +upstreamnt  +downstreamnt
atgagcgaagttgccaagaaacaaaagacggaagagggatctgtggtgaccaaggttgag
tctaatgaggtttccgagacagctgctcccgttactgccgaggtgaaggacattggagtc
accgagcctcgagttggaatcacagagtacatttctccgggactggccgggttccgaggt
attctgaagcagcgatacagcgatttcatggtcaacgagatcggtctggatggccaggtg
gtgcatttgaccgacactggggctcctggggctcaggatcgaagaagagagcgacgggag
gccgagcgggctgaagaagaggccaagaaggaaaaggaggccgaggaggaggaagaggcc
aagcccaagtttgttgtcagtcccgagaacactgagaagctgctcaatgtgttttcgcag
gcagatattgataacatggtggcattgttcaacactggaaccaagatggagaccgagaag
ggatacgacgataaagagacccgtacagccatccaccagacgatccgagaggtgtttgag
ggtaagctggagacgaagacgtccgccgacaacaagttcatcatcacgctggcgtctggt
aaccctcggtactcacgaactgctcgggagaagctcaacaagatgtacggccccaaaaag
gagtttgtgcacttttcgctatacaaggagaacaaggagaccatggaggctgtgaatctc
atttccaagttcctcaaggccaagcccagccagttcacttacgccggaaccaaggataag
cgaggagtcactgttcagaagatgacagctcgaggaatcagcggaggagtcgagcgagtc
aagggactgaacaagactcttcgaggcatgaagctgggctcgtttgcgtactccgacgaa
catttgcgtctcggagatctcgagggaaacgagtttatcatcaccattcgagaaattgat
ggtaagcagtctgagatagacgctgcgcttacttcgctcaaagagcacggattcatcaac
tactacggaatgcagcgatttggcaccttttcaatctccacccacgaggtcggacgccac
gtgctggcctctcaatgggacgaggtggtcgacatgcttctgcggccccaagaactcgct
ctggaggagtccaaggaggcgcgacagatctggaaagacaccaaggacgccggaaaggca
ctgacaaagatgcccttccgatgcgctgctgaatgcgctattctgaaggctctcaaaaac
gaccccaactcgctcaacgctgtcaacagaatcccccgaaacctcagaatcatgtacgga
cacgcataccagagctacgtgtggaacgcagtggtgtccaagcgagtagctatgggtctc
aaggtggtcgagggcgatcttgtgatcgacgataacgccaacaaggacggtaagattgag
gacagcaatgaagagtccggtcaggacctcaagatcgatcccttcactcgagctcgaccc
atcactgccgaggaaatagcctccaacaagttctccatctacgacattgtgctgcccact
cctggacacgatgtcatctaccctacccatcttgaagaggagtacaagaacatcatggcc
aaggacaacctcgacccccataagatggcccgaacgatccgagactactcgctggccggc
gggtaccgtcacgtgtttgccaagccttcgggagtcgagtggttctttgaaaagtactcc
aaccccgtcgagcagttcgtcaacactgatttggatatgctcgagaagggagtcgacaga
tacacccattgcgacgagcaggacggagacaagctcggtctggtgctcaagctgcagctg
ggctcggctcagtacgctactatggcgcttagagaggtcatgaaggtcgatacttcgaga
cggtcggattccttcaatgttagagtgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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