KEGG   Yarrowia lipolytica: YALI0F18194g
Entry
YALI0F18194g      CDS       T01033                                 
Name
(RefSeq) YALI0F18194p
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
yli  Yarrowia lipolytica
Pathway
yli03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:yli00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    YALI0F18194g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:yli03021]
    YALI0F18194g
   03019 Messenger RNA biogenesis [BR:yli03019]
    YALI0F18194g
Enzymes [BR:yli01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     YALI0F18194g
Transcription machinery [BR:yli03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     YALI0F18194g
Messenger RNA biogenesis [BR:yli03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     YALI0F18194g
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 2908669
NCBI-ProteinID: XP_505567
UniProt: Q6C195
Position
F:2420647..2421228
AA seq 193 aa
MTELKMCTVCASNQNRSMEAHKVLKEAGFDVESYGTGSAVRLPGPAYDKPNIYAFGTPYD
DIYNELSAQDERLYTANGLLTMLDRNRKIKTAPERWVEHKNVFDVVFTCEERCFEAVCDD
LMDRGEKLQRPVHVINVDIRDNHEDSVIGAQGILKLARSLADSKDLDAQIMGIMDSWQEQ
HPKLPLMHAVGYF
NT seq 582 nt   +upstreamnt  +downstreamnt
atgacggagctaaagatgtgcaccgtgtgtgcctcaaatcagaatcgatcaatggaggcc
cacaaggttctcaaggaggccgggttcgacgtggagagttacggaacgggaagcgcggtc
agactgccaggtccagcgtacgacaagcccaacatctacgccttcggaacgccatacgat
gatatttataacgagctcagtgcacaagacgagcgattgtacacagctaacggactgctg
accatgttggatcgaaatcgaaagatcaagacggctcctgagcgatgggtggaacacaag
aacgtctttgacgtggtcttcacctgcgaggagcggtgcttcgaagctgtttgcgacgac
ctgatggaccggggggaaaagttgcagcgacctgtgcatgttatcaacgtggatatccgt
gataaccatgaggactctgtgattggagcccaaggcatcttgaagctggcccggagtcta
gctgacagcaaagacctcgacgcacaaatcatgggtatcatggactcgtggcaggagcag
catcccaagctgcctctgatgcatgctgttggctacttttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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