KEGG T01033: YALI0F30173g

Yarrowia lipolytica: YALI0F30173g

Entry

YALI0F30173g CDS T01033

Definition

YALI0F30173p

Orthology

K03144

transcription initiation factor TFIIH subunit 4

Organism

yli Yarrowia lipolytica

Pathway

yli03022	Basal transcription factors
yli03420	Nucleotide excision repair

Module

yli_M00290

Holo-TFIIH complex

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:yli03022]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:yli03420]

SSDB

Motif

Pfam:

Tfb2 Helicase_C_3

Other DBs

NCBI-GI:

NCBI-GeneID:

Bordeaux:

UniProt:

Position

F:3774940..3776343

AA seq 467 aa
MTSQFKNSINDYLEGLPEAVLTRLYQSPATCLAVFRLLPALARTLIMGMIFNPDPIAVAD
VDALVKPSSQRLKLETQKKLRLLHIFTETQAHIIINPTFKKNLRAALVGGDQNISFGVPC
DTEDKHKVDVAFLDAHAVSQWEMILHFMVGTSIGRTPSDGVLNLLKHSGLMEPERGGLRI
TNAGFQFLLQDVNAQIWTLLLQYLNMSEYLQMDPVDVLNFIFMLGSLELGQDYSLSALSE
TQKHMLEDLRDYGIVYQRKASSRRFYPTRLATTLTSETAALRTASQSMEAATQDTISSSV
AADSGFIILETNFRLYAYTESPLQIAVLNLFVNLKTRFANMVTGQINRDSVRFALSNGIT
AEQIITYLSVHAHPRMKGMEHVLPPTVVDQIKLWQLEMDRIRATDGYLFSEFKNFDEYKD
VSTYAKELGVLLYENPGKRKFVSTLAGSQQIVEFVKRRNQKHRSSAN

NT seq 1404 nt +upstreamnt +downstreamnt
atgacgagccagttcaaaaacagcatcaatgactacctggaaggtcttccggaggcagta
ctaactcggctgtaccagtctccggccacatgtctggcggtgttccgactgctacctgct
ctggcaagaacactcatcatgggcatgattttcaaccccgatcccatagcagtagccgac
gtcgacgctctggtgaagccttcaagtcagcgactcaagctcgaaacacagaagaaactg
cgactgctccacattttcacagagacccaggcccatatcatcattaatccgacattcaaa
aagaacctgagggcagctctggtaggaggagaccagaacatttcgtttggagtgccctgc
gacacggaagacaaacacaaggtggatgtggcgtttttggatgctcacgctgtctctcaa
tgggagatgatcttacattttatggtcggaacgtcgattggaagaacacccagtgatgga
gtgctcaacctgctgaagcacagtggacttatggaacccgaacggggaggactgagaatc
accaatgcaggattccagttcttgctacaggatgtaaatgctcagatttggacactgttg
ctccagtatctcaacatgtccgagtatctgcagatggatcctgtagacgtgctcaacttc
attttcatgctaggttctctcgagctaggccaggactactcgctcagtgcactctccgag
acacagaaacacatgctggaggatctgcgggattacggtatcgtctaccagcgaaaagca
tcgtctagacgattctatcctacgcgactggctactactctgacatcagaaacggctgca
cttagaacagccagtcagagcatggaagcagctacacaagacacaatttcgtcttctgtt
gctgccgactctggatttatcattctggaaactaatttcagactctacgcctacacagag
tctccactacagatcgcagtactgaacctttttgtcaatcttaagacacgatttgcaaac
atggttaccggtcagatcaaccgagactcggttcgatttgcgctctcaaacggtattact
gccgaacaaatcatcacatatctctctgttcatgcacacccacgtatgaaggggatggaa
cacgttcttccccctactgtggtggatcagatcaaactgtggcaacttgagatggacaga
atccgagccaccgacggttacttgttctccgagttcaaaaactttgacgagtacaaggat
gtctccacttatgccaaggagctgggcgttctcttgtatgagaatcctggaaagcgaaag
ttcgtgtctacgcttgctggttctcagcagattgttgagtttgtcaaacgacgaaatcaa
aagcaccgtagctccgcaaactga

All links

Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   BORDEAUX-YLI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

Download RDF

DBGET integrated database retrieval system