KEGG   Yarrowia lipolytica: YALI0F31977g
Entry
YALI0F31977g      CDS       T01033                                 
Name
(RefSeq) YALI0F31977p
  KO
K10901  bloom syndrome protein [EC:5.6.2.4]
Organism
yli  Yarrowia lipolytica
Pathway
yli03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:yli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    YALI0F31977g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:yli03032]
    YALI0F31977g
   03400 DNA repair and recombination proteins [BR:yli03400]
    YALI0F31977g
Enzymes [BR:yli01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     YALI0F31977g
DNA replication proteins [BR:yli03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    YALI0F31977g
DNA repair and recombination proteins [BR:yli03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     YALI0F31977g
    Bloom's syndrome complex (BTR)
     YALI0F31977g
   FA (Fanconi anemia) pathway
     YALI0F31977g
SSDB
Motif
Pfam: DEAD RQC Helicase_C RecQ_Zn_bind ResIII
Other DBs
NCBI-GeneID: 2908122
NCBI-ProteinID: XP_506116
UniProt: Q6BZP6
Position
F:complement(3956904..3960806)
AA seq 1300 aa
MVVVQGTLRFKNNLDIHKEWLLKNEGNVPKPPPNRPLKRISANRPKSPTAKRIQSSGGVG
DGAESSITGIPKNKPDATSVGPRSTTQPMRTQTHPQPQKQATASNTNDMRPTIAGPQKAA
RSVTLMSSAGSETSPETHATAQRPNIAAPVAKSVPSQSKPFPDEFSEFSELSDFNLSSDD
LPAPIARKALRTATATTIPCTMPSVLATPKALRPPSAIPTNAELMELLQLYRKLRHRPQD
VLLLAQIDELEAALKPDTSAFDRDTLTQVPDTPARPNSRADSPQVVSDSEPDDEILELPE
KQTGKEKKEEPQQKKSLSDFDMDDIDLDLELELDMAKNDSDDECNDSMSFSDAQENFQKP
LAPPSVTPRKPIEASHHESEPIEIDSDDFESDFSVIQVQSPNREDRDPDSSALNPFGPGR
TLFPSSSPTRFSLADDDMDFDEALDKVGNRREVGASTQGILDIGIGIGDDLDLSDGSEEC
VAIEEDEYPWTQEVYKVLRERFMLNEFRANQLHAINATLNGDDVLVLMPTGGGKSLCYQL
PALVNGGKTRGLSVVISPLISLMKDQTEALTAKNISCAMFNSSQSVQERKQSLAALSSGD
IALLYVSPEMFQQSNIMQNTLHKLHEQNRLARIVIDEAHCVSSWGHDFRPDYKALVNVKS
RLPGVPIMALTATANEKVRMDIQGCLRPNRRFFKQSFNRPNLYYEVRLKTKNFQQEITDM
LRGRYRGQTGIIYCHSKKLCETTSEFLKEAGIKADFYHAGMETEQRTYVQGNWQSGKIQV
VCATIAFGMGIDKADVRYVIHCTVPRNMEGYYQETGRAGRDGLPSKCIVYFSQKDARQML
FNIANDEFLGENGKVDWALTQRQRTHHRELMQGVINYCENRVDCRRVQVLRYFNETFDPK
LCRNSCDNCQYGHEYTRETRDVTDVAKNIIKLVSAATQDNQNITVAYCGDLIRGSATKKV
KDLGHNELAGYGTGKVYDKTTLERIITKLILMKALRAHTERNKSGFACTYLRPDSLWRDV
LQGNEEVTIVTHVHDTGSKKTVPGLNRTNSRPEGEPMGFETASSFARRTNSLDPLTPSGA
YAQPNPKPTSRSRAALLTTTATSSIKNRVTKTSTPTTAKKPVARTLNGAGLQRTTASKTP
SRVKTTATINLTSDSSTSSKPAAPKPAGSAATTATKTTPISNNKSTSSFFDRPLSEAALT
QRHQGEAYKRLEEVRSDHCNEQNLTRPSSVCSEDVLEVLSYELPTSYSEFATLLPDHKQL
FVVFAPALKLLKQERESLKVNRGVSKGGATSLKDKFAYTS
NT seq 3903 nt   +upstreamnt  +downstreamnt
atggtggtcgtgcaaggtacactgcgatttaaaaacaacctcgacatacacaaggagtgg
ctactgaagaacgaggggaacgtgcccaaaccccctcccaatcgacctctgaaacgcatc
tctgccaatcgcccaaagtctccgaccgccaaacgaatacagtcatccggtggcgtgggg
gacggagctgagagtagcatcacaggcataccgaaaaacaagccagacgcgacatctgtc
ggcccaaggtcaaccacacagcccatgcggacacagacacatcctcaaccacagaaacaa
gcgacagcatcaaacacaaacgacatgaggccaacgatagcagggccacagaaggctgct
agatcggtcacactgatgtcatctgcagggtcggaaacatcgccagagacccacgctacg
gcgcaaagacccaacattgcagcaccggtggcaaaatcagtgcccagtcaatcgaaacct
ttccctgatgagttctcggagttctcggagctgtcggactttaatctctcatccgatgac
cttcccgcacctattgcaaggaaggctctacgcacagcaacagccacaaccatcccatgc
actatgccgtctgttcttgcaacccccaaagctttacgaccaccatcagccatccctaca
aatgcagaactgatggagttgctgcaactgtatagaaagctccggcatcgaccacaagat
gtgctgctgctagcacagattgacgagctggaggcagctctgaaacccgacacatctgcc
tttgatagagatactcttacccaggtacctgacacgccagcacgcccaaacagcagggcc
gactctccacaagttgtctctgactcggaacccgacgacgaaatattggagctacccgaa
aaacaaacaggtaaggaaaagaaagaggaaccgcaacagaagaaaagtctgtccgacttc
gacatggacgacattgatctggacctggaactcgagcttgatatggccaaaaacgactct
gacgacgagtgtaacgatagcatgtcgttcagtgatgctcaggaaaatttccagaagcct
ctggcgcctcctagtgtcacccccaggaaacctatagaggcatctcatcatgaatccgaa
cccattgagatcgatagtgacgatttcgagtctgatttctcagtgattcaagtccagagt
cccaatagagaagatagagaccccgactcttctgctcttaacccattcggacccggcaga
acgttgtttccatcatcttctcctaccagattcagcttggctgacgacgatatggacttt
gacgaggccctggacaaggtgggcaaccgacgcgaggttggggcgtccacacagggtatc
ctcgacattgggatcggtattggcgacgacctggacctctctgatggctcagaagagtgt
gttgcgatcgaggaagacgagtacccgtggacacaggaggtttacaaggtattacgcgaa
cggttcatgctcaatgaattccgcgctaaccagcttcatgcaattaatgccactttgaac
ggtgatgatgtgcttgttctcatgcctacaggcggaggaaagtctctctgctaccaattg
ccagccctggtgaacggtggcaagacacggggactttctgtggtcatttcgcctcttatt
tcgctcatgaaggaccagaccgaagctcttactgctaagaacatctcttgtgccatgttc
aattcgtcacaatctgtacaggaacgtaagcagtcgttggcagccctttccagtggtgat
attgcactgctctatgtttcccccgagatgtttcagcaaagcaacatcatgcagaacaca
cttcataagctgcatgagcagaatcggctagctcgaatcgtcattgacgaggcccattgt
gtttcttcctggggtcacgacttccgtcccgattacaaggctctagtaaatgtgaagtct
cgtcttcccggcgttcctataatggctctgacagctactgccaacgaaaaggtacgtatg
gacattcagggctgtcttcgacctaacaggcggttcttcaagcagtcgttcaaccgacct
aatctctactacgaggtgcggttgaagacaaagaactttcaacaggagattacagatatg
ctgcgaggccgctacagaggacaaacaggcattatttattgccactccaagaaactgtgt
gagaccacatctgagtttttaaaggaagctggaatcaaggctgatttctaccatgctgga
atggagacagagcagcgaacatacgtgcagggcaactggcaatctggcaaaattcaggtt
gtttgtgctaccattgcgtttggaatgggtatcgataaggctgatgtgcgatacgtcatc
cactgcactgtgcctcgaaacatggagggatactaccaggagactggccgagctggtcga
gacgggcttccttccaaatgcattgtgtacttcagccagaaggatgcccggcaaatgctg
ttcaacattgccaacgatgagtttctgggtgagaacggcaaagtagactgggcgttgacc
caacgtcagcgtactcaccaccgagagctgatgcagggtgtcattaactactgtgagaac
agagttgattgtcgacgagtgcaggtgctgcggtacttcaacgaaacgttcgatcctaag
ctctgtcgaaactcgtgtgacaactgtcagtatggccatgaatacactcgggagaccaga
gatgtgactgatgtggctaagaatatcatcaaattggtttccgccgccacccaggataac
caaaacatcactgtggcctactgcggtgacttgatacgaggttcagcaacgaagaaggtt
aaggatctgggtcacaacgaattggcagggtacggtacaggtaaggtgtacgacaagacg
acgttggaacgaattatcaccaaactgattctgatgaaggcgttgagggcacacacagag
agaaacaagtccggattcgcatgtacgtatctccgaccggactctttgtggcgagacgtg
ttacagggcaacgaggaggtgacaattgtcactcatgttcatgacactggcagcaaaaag
accgtgcctggtctcaatcggacgaacagtcgccccgaaggcgagcctatgggtttcgaa
acagccagttcgtttgcgagaaggaccaactctctggatcccctcactccctcaggagcg
tacgctcaacccaatcccaaaccaacttctcgaagccgtgctgctcttctgaccaccacg
gccacttccagtataaaaaacagagtgaccaagacgagcactcccacaactgcgaagaag
ccggtggctcggaccctcaatggagctggcctccagagaactactgcttccaaaacccct
tccagggtcaagaccacagctaccatcaacctgacatccgattccagcactagcagcaaa
cctgctgctcctaaacccgctggcagtgcagccacaaccgctaccaaaaccactccgatc
tcaaacaacaaatcgacttctagcttctttgacaggccactttcggaggccgcattgacc
cagagacaccaaggagaggcctacaagcgattagaggaggtgcggtctgatcactgcaac
gagcagaacctcacccggccttccagtgtgtgcagcgaggatgtgctggaggtgctgtcg
tatgagttgcccactagctacagcgagtttgcgactcttcttccggaccacaagcagttg
tttgtggtgtttgctccagctctgaagctgctgaagcaggagagggagtccttaaaggtc
aacagaggggtttccaagggtggagccacgtcgttgaaggacaagtttgcatacacgtca
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (59)   

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