KEGG   Yersinia pestis Antiqua (biovar Antiqua): YPA_1441
Entry
YPA_1441          CDS       T00369                                 
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
ypa  Yersinia pestis Antiqua (biovar Antiqua)
Pathway
ypa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ypa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    YPA_1441
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ypa03400]
    YPA_1441
Enzymes [BR:ypa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     YPA_1441
DNA repair and recombination proteins [BR:ypa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     YPA_1441
    RecFOR pathway proteins
     YPA_1441
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 nSTAND3 AAA_22 AAA_3 AAA_16 Mg_chelatase AAA_14 AAA_18 AAA_2 Sigma54_activat Rad17 RNA_helicase AAA_28 AAA_17 NTPase_1 NB-ARC TsaE AAA_24 Bac_DnaA Sigma54_activ_2 ABC_tran AAA_19 TetR_C_1 NACHT Parvo_NS1 IstB_IS21
Other DBs
NCBI-ProteinID: ABG13408
UniProt: Q1C814
Position
1621473..1622477
AA seq 334 aa
MIEADRLISAAVINDEESIDRAIRPKLLTEYVGQPHVREQMEIFIQAAKQRGDALDHVLI
FGPPGLGKTTLANIIANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYQVADLEHIVSRSAKCLGLELTPEGAHQLARRSRGTPRITNRLLRRVRDFAEVRADG
AINGEVAMKALDMLNVDAEGFDFMDRKLLLAVIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPYLIQQGFIQRTPRGRIATNHAYKHFGITREE
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgattgaagcagaccgtctaatatcggccgcagttatcaatgatgaagagagcattgac
cgggccatccgccctaagctactgactgaatatgttgggcaacctcatgtccgtgaacag
atggaaatcttcattcaggcagcaaaacaacgcggtgatgcactcgatcacgtgctgata
tttggccctccgggtttgggtaaaaccacgttggcgaacattattgccaacgagatgggg
gtcaatctgcgcacaacgtccggtccggtattggaaaaagccggtgatttagccgccatg
ttgaccaacctggagccgcatgatgtgctatttattgatgagatccaccgtttgtcaccg
gtagtagaagagattctttacccggcaatggaagattatcaattggacatcatgattggc
gaaggccccgcggctcgctcaatcaaacttgatttaccgccgtttaccctgattggtgcg
accacccgagcgggttcactgacatcacctttgcgagatcggtttggtatcgtgcagcgg
ctggagttttatcaggtggctgatctggagcatatcgtttcacgcagtgctaagtgtttg
gggctggaactcacgccggagggggcacaccagttggcacgtcgctcaagaggaacgccg
cgtattaccaaccgcctattgcgccgtgtacgtgatttcgccgaagttagagccgatggt
gccattaacggtgaggtcgcaatgaaagcgttggatatgcttaatgtcgatgctgaaggg
ttcgattttatggaccgtaaattgttgttagcggttatcgataaatttatgggcgggcca
gtagggctggataatctggcggcagcgattggtgaagagcgggaaaccatcgaagatgtt
ctggagccgtatctgattcaacaaggctttattcagcgtactcctcgtgggcgaattgcc
acaaatcacgcgtataaacattttggtattactcgggaagaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (31)   
   Pfam (31)   
All databases (42)   

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