KEGG   Yersinia pestis Antiqua (biovar Antiqua): YPA_1458
Entry
YPA_1458          CDS       T00369                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
ypa  Yersinia pestis Antiqua (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:ypa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ypa03016]
    YPA_1458
Enzymes [BR:ypa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     YPA_1458
Transfer RNA biogenesis [BR:ypa03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    YPA_1458
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNAseD_HRDC_C HRDC
Other DBs
NCBI-ProteinID: ABG13425
UniProt: A0A0H2Y5T1
Position
1641325..1642485
AA seq 386 aa
MKDNGYNDQENDVLNYQLITTNNALQQVCEQARTHAHIALDTEFVRTRTYYPQLGLIQLY
DGEQLSLIDPLPITEWQPFRALLQDLNVVKYLHAGSEDLEVFLNAFDQMPTPMIDTQVLA
AFSGRSLSCGFAMLVAEFEGVELDKSESRTDWIARPLSEKQCDYAAADVFYLLPLAAKLV
EATEAAGRMDAAKDECLLLCRRRSETLDPELAYREITNAWQLRGHQLACLQKLAEWRLRQ
ARERDLAVNFVVREEHLWQVARYQPTSLGELDSLGLSGQEIRYHGRTLLALVAEGNAVPE
DQLPPPIANLIDQPGYKKVFKDIKALIQSVSERSGLSSELLASRRQINQLLNWHWKLKLS
DAQPELLTGWRGDLLSSELLEILQHY
NT seq 1161 nt   +upstreamnt  +downstreamnt
ttgaaagataacggatataacgaccaagagaatgacgttttgaattatcagttgatcacg
accaataacgcattgcaacaggtctgcgaacaagcccggacacatgctcacatcgcgttg
gatacagagtttgtcagaacgcgcacttactaccctcagttgggtttgattcaactgtat
gatggtgaacaactctcacttatagatccattacctatcacggaatggcagccttttcgc
gcgttactgcaagatctgaatgtggtgaaatatttacacgcaggcagtgaagatctcgaa
gtgtttttaaacgcttttgaccagatgccaaccccgatgattgatactcaggtattagcg
gcattttctggccgtagcctatcctgcggctttgccatgctggtggctgagtttgaaggt
gttgagttagataaaagtgaatcacgtacagactggattgcccggccgttgagtgaaaaa
cagtgcgattatgcggcggctgatgtgttttatcttttacctctggcggctaaattagtc
gaagccactgaggcggcagggcggatggacgcggcgaaagacgaatgtctattgctgtgc
cgccgtcggagtgagacgctcgatcctgaactggcttaccgtgagattaccaatgcctgg
caactccgtggccatcaactggcatgtttgcagaaattagccgaatggcgtttacgtcag
gcacgggagcgggatttggcggttaactttgtggttagggaagagcacctgtggcaagtt
gcccgctatcaaccaacatcactcggtgagttagattctcttggcttgagtgggcaggag
atccgctatcacgggcgaacattgctggcactggtcgccgaagggaatgccgtccctgaa
gatcagcttcctcccccgattgctaacttgattgaccaaccggggtacaaaaaagtcttt
aaagatattaaagccttgattcaatcggtcagtgaacgtagcggattaagcagtgaatta
ctggcatcacgtcgccaaattaatcagttactcaattggcactggaagttgaagctttca
gatgctcaacctgaattattaacaggctggcgtggcgatttattgtcttctgaattgctt
gaaatcttacaacactattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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