KEGG T00369: YPA

Yersinia pestis Antiqua (biovar Antiqua): YPA_3005

Entry

YPA_3005 CDS T00369

Gene name

malS

Definition

periplasmic alpha-amylase

Orthology

K01176

alpha-amylase [EC:3.2.1.1]

Organism

ypa Yersinia pestis Antiqua (biovar Antiqua)

Pathway

ypa00500	Starch and sucrose metabolism
ypa01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Starch and sucrose metabolism [PATH:ypa00500]

SSDB

Motif

Pfam:

Alpha-amylase Cache_3

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3344240..3346303)

AA seq 687 aa
MKRLTLPLLLVLSPAAMANWSLQHFPAFTEQDSGIFLSSSSLTKGEYPLKFYQDKQCWQP
TGPVKLNQMLSLQPCQENIAIPWRLFRDGQYQARIDTRSGTPTLTLSVTAPVAEAVQVVT
HVCQRWDGNPVTVDVSKTFAEGEIVRDFYSGQTATVSLGKITLRPAPESGGLLLLESAQT
QQAAPFSWQNATVYFALTDRFNNGNPANDHSYGRHGDGMQEIGTFHGGDLAGLTEKLDYL
QQLGVNALWISSPLEQIHGWVGGGTKGDFPHYAYHGYYGLDWTRLDANMGTEQDLRTLVE
QAHKRGIRILFDVVMNHVGYATLADMQNDQFGALYLQGDQQEKTLGKRWSDWTPGSGQTW
HSFNDYINFSDKTAWDNWWGKKWIRTDIGDYDTPGYDDLTMSLAFLPDIKTESTQPSGLP
VFYRNKPDTAAQEIAGATPRDYMTHWLSQWVRDYGIDGFRVDTAKHVEKPAWQQLKQQSI
AALAEWKAAHPEQALDNLPFWMTGEAWGHGVMKSDYYQNGFDAMINFDFQDQANQALACF
SSIESTYNQMAEKLQNFNVLSYLSSHDTRLFFKDDAQQSLAKQQRAGSLLLLAPGAVQIF
YGDESGRKFGPTGSDPLQGTRSDMNWSELSGEKGALLAHWQKVSQFRARHPAIGAGVQQS
QQTANYYAFSRQHQGDKVLVVWVGDKN

NT seq 2064 nt +upstreamnt +downstreamnt
atgaaacgtctcacactccccttgctactggttctttcaccagcagcgatggcgaactgg
tccctacagcatttcccggcttttactgaacaggacagcggtatttttctcagtagcagc
tcactgaccaaaggcgaataccctctaaaattttatcaggataaacagtgctggcagcca
accgggccggtaaagctgaaccaaatgctctcgttgcagccttgccaggagaatatcgcg
ataccgtggcggttgttccgtgatggccagtatcaagcgcgaatcgatacccgtagcggc
accccgacgctgaccttaagtgtcaccgcacccgtagcggaggcagtccaggtcgtcacc
cacgtttgccaacgctgggatggcaatcctgtgaccgtggatgtcagtaaaacctttgcc
gaaggtgaaattgtacgggatttctattccggccaaacggcaaccgtttctctcggcaaa
attacgttacgacccgccccagagagtggtggtttactgctgttggaatcggcccaaaca
cagcaagccgccccttttagctggcaaaacgctacggtctattttgccctgacggacaga
tttaataacggcaacccagcgaacgaccatagctatggccgtcatggcgatgggatgcag
gagataggaacgtttcacggtggcgatttggcggggcttaccgagaagctggattatctg
caacagcttggggtcaacgcactgtggatcagttctccactggaacaaattcacggctgg
gtcggcggggggaccaaaggcgacttcccacattatgcctatcatggctactacgggctg
gactggacccgtctggatgccaatatgggcaccgaacaggatttacgcacactggttgaa
caggcacataaacgcggcattcgcatcctatttgatgtggtgatgaatcatgtgggttat
gcaacgctggcggatatgcagaacgaccaattcggggcgctctacctgcaaggcgatcag
caggaaaaaaccttgggtaagcgttggagcgactggacccctggcagcgggcagacctgg
cacagctttaatgattacatcaacttcagtgataagaccgcttgggataattggtggggt
aaaaagtggatccgcaccgatattggtgattacgacacccccggttatgacgatctgacg
atgtcgctggccttcctacccgatatcaaaacagaatcgacgcagcccagcggtttgcca
gtgttttaccgtaacaaaccggacaccgcagcccaagaaatcgccggtgcgacaccccgt
gattatatgacgcattggttaagccaatgggtacgcgattacggcattgacggttttcgg
gttgatactgccaagcatgtagagaaacccgcctggcaacaattaaagcagcagagcatc
gcggcactggccgaatggaaagccgcacatccagaacaggcgctggataatctgccattt
tggatgaccggagaggcttggggccacggtgtcatgaaaagtgattactaccaaaatggc
tttgatgccatgattaattttgattttcaggatcaggcaaatcaggcgctggcctgcttc
tcatctatcgagagtacctacaaccaaatggcggagaaactgcaaaacttcaatgtgttg
agctacctctcgtctcacgatacccggttattctttaaagacgatgcacaacagtcactg
gcaaaacagcagcgagcaggctctttactgttgttggctccgggggcagtacaaatcttc
tacggtgatgaaagcgggcggaagtttggcccaaccggttccgatccgttgcagggtacc
cgttcggatatgaactggagtgagctatcgggcgaaaaaggcgcactgttggcccattgg
caaaaagtcagtcaattccgcgcccgtcatcccgcgataggcgctggtgtacaacaatcg
caacaaaccgccaattactatgcctttagccgccaacatcagggcgataaggttctggtc
gtttgggtcggtgataagaactga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-YPA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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