KEGG Y.pestis_Antiqua: YPA

Yersinia pestis Antiqua (biovar Antiqua): YPA_3437

Entry

YPA_3437 CDS Y.pestis_Antiqua

Gene name fadA

Definition 3-ketoacyl-CoA thiolase (EC:2.3.1.16)

Orthology K00632 acetyl-CoA acyltransferase [EC:2.3.1.16]

Pathway ypa00071 Fatty acid metabolism
ypa00280 Valine, leucine and isoleucine degradation
ypa00281 Geraniol degradation
ypa00362 Benzoate degradation via hydroxylation
ypa00592 alpha-Linolenic acid metabolism
ypa00642 Ethylbenzene degradation
ypa01100 Metabolic pathways

Class Metabolism; Lipid Metabolism; Fatty acid metabolism [PATH:ypa00071]
Metabolism; Lipid Metabolism; alpha-Linolenic acid metabolism
[PATH:ypa00592]
Metabolism; Amino Acid Metabolism; Valine, leucine and isoleucine
degradation [PATH:ypa00280]
Metabolism; Xenobiotics Biodegradation and Metabolism; Ethylbenzene
degradation [PATH:ypa00642]
Metabolism; Xenobiotics Biodegradation and Metabolism; Benzoate
degradation via hydroxylation [PATH:ypa00362]
Metabolism; Xenobiotics Biodegradation and Metabolism; Geraniol
degradation [PATH:ypa00281]

SSDB

Motif Pfam: Thiolase_N Thiolase_C ketoacyl-synt
PROSITE: AA_TRNA_LIGASE_I THIOLASE_1 THIOLASE_2 THIOLASE_3

Other DBs NCBI-GI: 108809428
NCBI-GeneID: 4119640
JGI: YPA3437
UniProt: Q1C2C3

Position 3841911..3843074

AA seq 387 aa
MENVVIIDAVRTPMGRSKGGAFRHVRAEDLSAHLMRAVISRNPGLNAAEIDDIYWGCVQQ
TLEQGFNIARNASLLAEIPHSVPAVTVNRLCGSSMQALHDGARAIMVGDAKISLIGGVEH
MGHVPMNHGVDFHPGMGRTVAKAAGMMGLTAEMLAKIHNISRQSQDEFAFRSHQRAYAAT
QAGHFAKEIVATNGHDAEGVLKRFDFDEVIRPETNLSGLAALRPAFDPVNGTVTAGTSSA
LSDGASAMLIMSESRAKSLGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLELA
DIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLM
ERRDVQFGLATMCIGLGQGIATVFERL

NT seq 1164 nt +upstreamnt +downstreamnt
atggaaaatgtagtcattattgatgccgtgcgtacaccgatgggccgctccaaagggggg
gcttttcgtcatgtacgggctgaagacctctctgcccatttaatgcgtgccgttatcagc
cgtaatcctgggttgaatgctgctgaaatcgacgatatttattggggttgtgtgcaacaa
acgttggagcagggtttcaatattgcccgtaacgcgtctttattagccgaaattcctcac
agcgtacccgctgttaccgttaatcgcctgtgtggctcatcaatgcaagctctgcatgat
ggcgcacgagccattatggtgggtgatgcgaagatcagtttgattggtggagtggaacat
atgggccacgtgccaatgaaccacggcgtggatttccatccaggaatgggtcgcactgtt
gccaaagcggctggaatgatgggcttgaccgctgagatgttggctaaaattcacaatatc
agccgccagtcacaagatgagtttgcattccgttctcatcaacgtgcttatgctgcgact
caggcagggcatttcgcaaaagaaatcgttgcaaccaatgggcatgatgcagaaggtgta
ttaaaacgctttgatttcgatgaagtcattcgtcctgaaacaaatctatccggtctagca
gccttgcgccctgcatttgatccggtaaatggcacagttactgcagggacatcatcagcc
ttgtccgatggggcttctgcgatgctgattatgagcgaatccagagcgaagtcattaggt
ttaaccccacgagcacgtatccgttcgatggcggtcgtaggttgtgacccctcaatcatg
ggctatggcccggtacctgctagtcaattggcattaaaacgtgctggccttgaattggca
gatattggtttatttgagttaaacgaggcgtttgctgctcagtcactggcttgtctgaaa
ggtttaggtttgttagaaagcatggacgataaagtaaacctgaacggtggagccattgca
ttaggtcacccgttaggctgttcaggcgcacggatctctaccacattgttaaacctgatg
gagcgccgtgacgtacaatttgggctagcaaccatgtgtatcggcctagggcaaggtatt
gctaccgtatttgagcgcttatag

All links

Pathway (7)   
   KEGG PATHWAY (7)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-YPA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (3)   
   PROSITE (4)   
All databases (25)

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