KEGG   Yersinia pestis Antiqua (biovar Antiqua): YPA_3490Help
Entry
YPA_3490          CDS       T00369                                 

Definition
(GenBank) DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase (EC:4.2.99.18 3.2.2.23)
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ypa  Yersinia pestis Antiqua (biovar Antiqua)
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ypa00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    YPA_3490
Enzymes [BR:ypa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     YPA_3490
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     YPA_3490
DNA repair and recombination proteins [BR:ypa03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     YPA_3490
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
Position
complement(3895174..3895983)
Genome map
AA seq 269 aa AA seqDB search
MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILTLSDQPVLSVQRRAKYLL
LELPKGWIIIHLGMSGSLRVLSEETAAEKHDHVDLVVSNGKILRYTDPRRFGAWLWAKDL
ETSNVLAHLGPEPLSDEFTAQYLFDKSRNKRTLIKPWLMDNKVVVGVGNIYASESLFAAG
ILPDRAAGSLTDAESVLLVATIKAVLLHSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRA
GEPCRQCGHPIEIAKHGQRSTFFCRHCQH
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
gtgcctgaattaccagaagttgaaaccagccgacgcgggatcgaaccttatcttgtcggc
cagacaatcctttatgctgtggtcagaaatgcccgtttacgctggccggtatccgatgaa
attctaacacttagcgatcaacccgtactgagtgtccaacgccgggcgaagtatttactg
ctagagctgcctaaaggctggatcatcatacatttaggtatgtcaggtagcctgcgcgta
ttatctgaagagactgcagctgaaaagcacgatcatgtcgatttggtggtcagtaacgga
aaaatattgcgttataccgacccacgacgttttggtgcctggttgtgggcgaaagacctt
gagaccagtaatgtattagcccatttagggccagaaccactaagtgatgaatttactgcg
caatatctgttcgataaatcacgtaataaacgcacattgattaaaccgtggttgatggat
aacaaagtggtcgtcggagtgggtaacatttatgcgagcgaatcactgtttgctgctggg
attttgccagatcgtgccgcaggctcattgactgacgctgaatccgtattgctggtagca
acgataaaagccgtgttattgcattcgattgagcagggcggcaccacattacgtgatttt
ctgcagtcggatggtaaaccagggtatttcgcgcaagagttgcaggtctatgggcgtgcg
ggtgaaccatgtcggcagtgtgggcatcccattgaaatagcgaaacacgggcagcgcagc
acgttcttttgccgccactgccagcattga

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