KEGG   Yersinia pseudotuberculosis PB1/+ (serotype 1B): YPTS_2100
Entry
YPTS_2100         CDS       T00744                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
ypb  Yersinia pseudotuberculosis PB1/+ (serotype 1B)
Pathway
ypb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ypb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    YPTS_2100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ypb03400]
    YPTS_2100
Enzymes [BR:ypb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     YPTS_2100
DNA repair and recombination proteins [BR:ypb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     YPTS_2100
    RecFOR pathway proteins
     YPTS_2100
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 nSTAND3 AAA_22 AAA_3 AAA_16 Mg_chelatase AAA_14 AAA_18 AAA_2 Sigma54_activat Rad17 RNA_helicase AAA_28 AAA_17 NTPase_1 NB-ARC TsaE AAA_24 Bac_DnaA Sigma54_activ_2 ABC_tran AAA_19 TetR_C_1 NACHT Parvo_NS1 IstB_IS21
Other DBs
NCBI-ProteinID: ACC89063
UniProt: B2K324
Position
2323140..2324144
AA seq 334 aa
MIEADRLISAAVINDEESIDRAIRPKLLTEYVGQPHVREQMEIFIQAAKQRGDALDHVLI
FGPPGLGKTTLANIIANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYQVADLEHIVSRSAKCLGLELTPEGAHQLARRSRGTPRITNRLLRRVRDFAEVRADG
AINGEVAMKALDMLNVDAEGFDFMDRKLLLAVIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPYLIQQGFIQRTPRGRIATNHAYKHFGITREE
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgattgaagcagaccgtctaatatcggccgcagttatcaatgatgaagagagcattgac
cgggccatccgccctaagctactgactgaatatgttgggcaacctcatgtccgtgaacag
atggaaatcttcattcaggcagcaaaacaacgcggtgatgcactcgatcacgtgctgata
tttggccctccgggtttgggtaaaaccacgttggcgaacattattgccaacgagatgggg
gtcaatctgcgcacaacgtccggtccggtattggaaaaagccggtgatttagccgccatg
ttgaccaacctggagccgcatgatgtgctatttattgatgagatccaccgtttgtcaccg
gtagtagaagagattctttacccggcaatggaagattatcaattggacatcatgattggc
gaaggccccgcggctcgctcaatcaaacttgatttaccgccgtttaccctgattggtgcg
accacccgagcgggttcactgacatcacctttgcgtgatcggtttggtatcgtgcagcgg
ctggagttttatcaggtggctgatctagagcatattgtttcacgcagtgctaagtgcttg
gggctggaactcacgccggagggggcacaccagttggcacgtcgctcaagaggaacgccg
cgtattaccaaccgcctattgcgccgtgtacgtgatttcgccgaagttagagccgatggt
gccattaacggtgaggtcgcaatgaaagcgctggatatgcttaatgtcgatgctgaaggg
ttcgattttatggaccgtaaattgttgttagcggttatcgataaatttatgggcgggcca
gtagggctggataatctggcggcagcgattggtgaagagcgggaaaccatcgaagatgtt
ctggagccgtatctgattcaacaaggctttattcagcgtactcctcgtgggcgaattgcc
acaaatcacgcgtataaacattttggtattactcgggaagaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (31)   
   Pfam (31)   
All databases (42)   

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