KEGG   Yersinia pseudotuberculosis PB1/+ (serotype 1B): YPTS_3147
Entry
YPTS_3147         CDS       T00744                                 
Name
(GenBank) exodeoxyribonuclease V, beta subunit
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
ypb  Yersinia pseudotuberculosis PB1/+ (serotype 1B)
Pathway
ypb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ypb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    YPTS_3147
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ypb03400]
    YPTS_3147
Enzymes [BR:ypb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     YPTS_3147
DNA repair and recombination proteins [BR:ypb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     YPTS_3147
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 vWA-TerF-like AAA_11
Other DBs
NCBI-ProteinID: ACC90102
Position
complement(3481595..3485257)
AA seq 1220 aa
MTPTTPQRLEPLALPLYGERLIEASAGTGKTFTIGVLYLRLLLGLGGDAAFRRPLMVEEI
LVVTFTEAATEELRGRIRDNIHGLRIACVRGVSDDPMYQALLAEITDWAVAAAQLLAAER
QMDEAAIYTIHGFCQRMLANNAFESGILFEQTLVQDELPLWRQACADFWRRHCYPLPLVI
ARAVSQEWSGPEALLSDLSAYLQGETPKFRQAPGDDETILSRHQHVVTQIDALKAEWRLA
APELEALISRSGVDKRSYSSKHLPNWLEKVGLWAEQETEDYQLPKELEKFRQSVLLEKTK
KGAAPQHTLFSAIDSIFEQPLTLRDLILARAISEIRFSVQQEKRQRAELGFDDLLSKLDA
ALQQSGGELLAQSIRTRYPVAMIDEFQDTDPQQYRIFHTVYGGQEACALLLIGDPKQAIY
AFRGADIFTYIRARSEVSAHYTLETNWRSSFPMVQSVNRLFSLVNTPFLFEQIPFINVAA
AKKNHDLSFEIKGEKQPALHFWLQPGDGVGVSEYQQVMARQCAAQIRDWLTAGQQGQAEL
LTTKGPKPVQASDITILVRSRAEAALIRDALSALAIPSVYLSNRDSVFETTEAKDLLWLL
QAVLAPEQERALRSAMATGILGLDARMLDALNHDERAWDALVDEFDHYRQHWQRRGVLPM
LREMMARRHLAENLLATPGGERRLTDLLHLGELLQEAASQLDSEHALIRWLAQQIAQPNP
QSDSQQLRLESDRHLVRVVTIHKSKGLEYPLVWLPFIGNFRQQQNVLYHDRHSFEALLDL
NADEESQALAEEERLAEDLRLLYVALTRSVYHCSVGIAPLIKGGRKKQGESDMHRSALGY
LVQHGQPGDAHVLSEKLTELARSSNGDICVSPVEPPDDKPWQPQPEALPELTARHFTRKM
QDYWRVTSYSGLQQSGSTKKLYGSATGDVSQALGAPLQVLLPRLDIDAVGEQAVVTEDDH
LTPHTFPRGAAPGTFLHDLLEPLDFSQPIELAWLSERLQQQGFSEQWAPVLHQWLNDIVQ
TPLTDTGATLAGLSPERKQAELQFYLPIDSLLRAEVLDRLIKQYDPLSRQCPVLDFQQVR
GMLKGFIDLVFCWQGQYYLLDYKSNWLGEDSRAYTVEAMTQAMAEHRYDLQYQLYTLALH
RYLRHRLADYDYQRHFGGVIYLFLRGVDQQHSGHGIFNCRPEQKLIEEMDRLFSGTIGSN
ATASDKSGSNVIHSGERASR
NT seq 3663 nt   +upstreamnt  +downstreamnt
atgacacccacgactccccagcggcttgagccgctggcgcttcccctctatggcgagagg
ctgatagaagcctctgccggtactggtaagacatttaccatcggggtcctttatcttaga
ttgttgcttgggttagggggcgatgctgcattccgtcgccctttgatggtggaggaaatc
ctagtggtgacctttactgaagccgcgaccgaagagctcagggggcgaattcgcgataat
attcatgggttgcgtatcgcttgcgttcggggagtcagtgatgacccaatgtaccaggct
ctattagccgaaatcaccgattgggccgtagccgccgcgcaattattggcggctgagcgt
cagatggatgaagccgcgatttacactattcatggtttctgccaaagaatgctggcaaat
aacgcttttgaatccggcattttattcgaacaaacgttagttcaggatgaactcccgtta
tggcggcaggcctgtgctgacttctggcggcgtcattgttatccgcttcccttagtcatc
gcacgggcggtcagtcaggagtggagcgggccggaggcattactcagtgatctgagtgct
tatttacaaggtgaaacgccaaagtttcggcaagcgcccggtgacgatgaaacgatcctt
agccgccatcagcacgttgtgacacagattgatgcacttaaagcagagtggcgcttagcc
gcccctgaattagaagcattaattagtcgttctggcgttgataaacgcagttatagcagc
aagcacttacccaactggctggaaaaagtaggattatgggcggagcaggaaacggaagat
tatcaattacccaaagaactggaaaaatttcgccagtcggtgttattggaaaagaccaag
aagggagccgccccacaacatactttatttagtgcgatagactcgatatttgaacagccc
ctaacgttgagggatcttattttagcccgagccatcagcgaaatacggttttctgtacag
caggaaaaacggcagcgtgcagagctggggtttgatgatttactcagtaagttagatgcc
gcattacaacaatcggggggggagttgctcgctcaatctattcgtacccgttaccccgtt
gcaatgattgatgaatttcaggataccgacccgcaacaatatcgcattttccacaccgtt
tatggcgggcaagaagcgtgcgctttactgttgatcggtgatcctaaacaggctatttat
gcttttcgtggcgcagatatatttacctatattcgcgcccgttcagaagtaagcgcccac
tacacattggaaaccaactggcgctcttcttttcccatggtgcaatcagtgaacaggcta
tttagtctggttaatacgcctttcttatttgagcaaatcccctttattaatgtcgccgcc
gccaaaaagaatcatgatttatcctttgaaattaaaggagaaaagcaacctgcgctacat
ttttggctgcaacccggtgacggtgttggtgtaagtgagtaccaacaagtaatggctaga
caatgtgcagcgcaaattcgtgattggttgactgccggccagcaggggcaagcagaacta
ctgaccacgaaaggaccaaaaccggttcaggcatcagatataaccatactggtgcgtagc
cgggcagaggccgcattgatacgtgatgcacttagtgcgctggcgatcccatcggtctat
ttatctaatcgtgacagtgtctttgagactacagaagccaaagatctcttgtggttactg
caagccgtgttagcaccagagcaggagcgcgcactacgtagtgctatggctacggggatc
ttggggttggatgccagaatgttggatgcgttaaatcacgatgagcgagcttgggatgcg
ctggtcgatgagtttgatcactatcgccagcattggcagcgccgtggggtattacccatg
ctgcgggagatgatggcccgccgccatttagctgaaaacttgttggcaacacccggtggg
gagcgtcggctgacagatttactacatcttggggaattactgcaagaggccgcctcgcaa
ctggatagtgagcacgcactaattcgctggttggcccagcaaattgctcaacccaatccc
cagtcagatagccaacaattacgcttggaaagtgatcgccatttggttcgagtggttact
atccataaatcgaaagggttggaatatccattagtttggctgccttttatcggtaatttt
cggcaacaacagaatgtgctttaccatgaccgacatagctttgaggctttactcgatctt
aatgctgatgaagaaagccaggctttagctgaagaagaacgtctggctgaggatttacgg
ctattgtatgtcgcgttgacgcgttcggtttatcattgcagcgtgggcattgcaccgctg
attaaaggggggaggaaaaagcaaggcgagagtgatatgcatcgcagtgcgttaggttat
ttggttcagcatggtcaacccggtgatgctcatgttctaagcgaaaagttaactgagtta
gcgcgctcatcgaatggtgatatttgcgtttcgcccgttgagcctcctgatgataaacct
tggcaaccacagcccgaagccttgcctgaacttaccgcccgccattttacccgaaaaatg
caagattattggcgcgtaaccagctattcaggtttacagcagtctggctctacaaagaag
ctgtatggttctgcaacaggggacgtatcgcaggctctgggggcaccattacaggtcttg
ttgccacggttggacattgatgccgtaggtgagcaggcggtggtgacagaagacgaccat
ttaacacctcataccttccctcggggagcggccccagggactttcttacatgatttgctt
gagccattagattttagtcaaccgattgaattggcgtggttgtctgagcggctacagcaa
cagggttttagcgaacagtgggcaccggtgttacaccagtggctaaatgatatagtgcaa
acgccgcttaccgataccggggccactttggctgggttgtcgccagagcgcaaacaggcc
gagctacaattttatctacccatcgatagcctgctacgggccgaggtattagaccgttta
atcaaacagtatgatccactttcccggcagtgccctgtattggattttcaacaggttaga
gggatgctcaaggggtttattgacttggttttttgctggcaggggcaatattacttgctg
gattacaaatccaattggttgggtgaggacagtcgtgcttataccgttgaggcgatgaca
caagcgatggctgaacatcgctatgatctgcaataccaactttatactttggctttacac
cgctatttacgccatcgtttggccgattatgactatcaacgccactttggtggggttatt
tacctcttcttgcgcggcgttgatcagcaacattcagggcacggtatttttaattgccgg
cctgaacagaaactgattgaagaaatggatcgcttattcagtggcacaattggcagtaac
gcaaccgcgagtgacaaaagcggtagcaatgtcattcacagcggcgagagggcatcacga
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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