KEGG   Yersinia pestis D106004: YPD4_0456
Entry
YPD4_0456         CDS       T01832                                 
Name
(GenBank) DNA polymerase II
  KO
K02336  DNA polymerase II [EC:2.7.7.7]
Organism
ypd  Yersinia pestis D106004
Brite
KEGG Orthology (KO) [BR:ypd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ypd03400]
    YPD4_0456
Enzymes [BR:ypd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     YPD4_0456
DNA repair and recombination proteins [BR:ypd03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    YPD4_0456
SSDB
Motif
Pfam: DNA_pol_B DNApolII_N DNA_pol_B_exo1 DNA_pol_B_2 RNase_H_2 GGDEF_2
Other DBs
NCBI-ProteinID: ACY57365
Position
complement(555958..558327)
AA seq 789 aa
MGQTRQGFLLTRHWRDTPAGTEVEFWLATDEGPQHVRLPPQPSVAFIPAEQQQRAETVLR
AERHWQLRPLALTDFHQRPVLGLYCTQHRQLIRLEKRLRESGVNVYEGDIRPPERFLMER
FITAPVWFSGQENDHGPLLNTQLKPADDYRPTLKLVSLDIETSEHGELYCIGLEGCGQRQ
VYMLGPPNGETTGTPLDFNLEYVASRPLLLEKLNQWLAVHDPDAIIGWNLVQFDLRVLQK
HADRYQIPLRFGRGGNLLEWREHGFKQGHFFASAAGRLIIDGIEALKSATWNFPSFSLES
VSQTLLGEGKASDSPYQRMDEINQRFAHDKPALARYNLKDCELVTRIFAKTELLSFLLER
STVTGLAADRSGGSVAAFTHLYLPRMHRIGYVAPNLGELPEEHSPGGFVMDSQPGLYDSV
LVLDYKSLYPSIIRTFLIDPVGLVAGMQQPDIQHSVPGFRGAWFSREKHCLPAIVNQIWQ
GREAAKRQQNKPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHEIMRQTRELIE
AQGYQVIYGDTDSTFVWLKSAHNDEQATRIGNELVQLVNQWWQNHIQQNFNLPCALELEF
EIHYRRFLMPTIRGAEQGSKKRYAGLISTPTGDQMVYKGLETVRTDWTPLAQQFQRELYL
RIFQQQPYQDYVRDYVARTLNGELDEQLVYRKRLRRRLDDYQRNVPPHARAARLADEFNR
KLGRPLQYQNGGWISYVMTTAGPEPLETRQSPIDYDHYLTRQLQPVADAILPFTQDDFTT
LITGQMGLF
NT seq 2370 nt   +upstreamnt  +downstreamnt
gtggggcaaacccgtcagggcttcctgctgacccgccactggcgggatacaccagcaggc
accgaagtcgaattctggttggcaacggatgaagggccacagcatgtcaggctgccgccc
cagccatcggtcgcctttatccctgccgaacaacagcaacgggcagaaaccgtactacgc
gcagaacgccattggcaactgcgccctctcgcgctgactgattttcaccaacgcccggtt
cttggcctgtattgcactcagcaccgccagttgatccgcctggaaaaacgactgcgcgaa
agtggcgtgaatgtttacgaaggtgatattcgcccgccagaacgctttctgatggagcgg
tttattactgcccccgtatggtttagtgggcaggaaaatgaccatggcccactcctcaat
acacaactaaaaccggctgatgactatcgcccaaccctcaaactggtttctctggatatc
gaaaccagtgaacacggcgagctgtactgtattgggctggaaggctgtgggcaacggcaa
gtctatatgttagggccacccaatggggagaccacgggcaccccgctcgatttcaatttg
gaatacgttgccagccgcccattactattagaaaaactcaaccaatggctggcagtgcat
gatcctgatgccattattggctggaatctggtgcagttcgatttacgggtattacagaaa
cacgcagatcgctaccagatcccgctgcgctttggccgtggcggtaacctgctcgagtgg
cgtgaacacggctttaagcaagggcatttctttgcttccgccgccgggcgtttaattatt
gatggtattgaagcactgaaatccgccacgtggaacttcccttctttcagtctggaatct
gtctcgcaaactttacttggcgagggtaaagccagcgatagcccctatcagcggatggat
gaaattaatcagcgcttcgcccacgataaaccagcactggcccgttataacctgaaagac
tgtgagttggtcacgcggatttttgccaaaacggagttgctgagtttcttacttgaacgc
tcaaccgtgaccgggctggcagccgatcgtagtggcggttcggtggccgcgtttacccac
ctttatctgccacggatgcaccgtatcggctatgttgcccccaatttaggtgaattgccg
gaagagcacagccccggtggttttgtaatggattcccagcccggtttgtatgattcagtg
ctggtacttgactataaaagcctgtacccatcgattatccgcacctttttaatcgatccg
gtcggtctggtggcggggatgcagcaacctgatattcagcactcggtaccggggtttcgt
ggggcctggttctcacgcgagaaacattgtctgcccgccattgttaaccaaatctggcaa
gggcgggaagcagcgaaacgccagcaaaataagccgctgtcacaggcgctgaaaatcatt
atgaatgccttttatggcgtgctgggttccagcggctgccgttttttcgatcctcggctg
gcatcatccattaccctgcgtggtcatgagatcatgcgacaaacccgtgagttaattgaa
gcgcagggttatcaggtgatttatggtgacaccgattcaacctttgtttggctgaaaagc
gcccacaacgatgagcaagcaacacgcatcggtaacgagctggtgcagttagtgaatcaa
tggtggcaaaaccatatacagcaaaactttaatctgccctgtgcattagagctggagttc
gaaatccactaccggcgttttttgatgcccactattcggggcgcggagcaaggcagtaaa
aaacgctatgcgggactcatctccaccccgacgggtgatcaaatggtttataaagggctg
gaaaccgtccgtaccgattggaccccactggcacagcaattccagcgcgagctgtatctg
cgtatcttccaacaacaaccgtatcaagattatgtgcgggattacgtagcccgtaccctg
aatggcgagttggatgagcaactggtttaccgcaaacgcctgcgtcggcggttggatgac
tatcagcgcaacgtccccccgcacgccagagcggcacgtctggccgatgagtttaaccgt
aagcttggccggccactgcaatatcaaaatggcgggtggatcagctatgtgatgaccacc
gcaggccccgaacctttagaaacgcggcaatcgcccatcgattatgatcactatctgaca
cgccagctacaacccgtagcagacgctatacttcccttcactcaggatgatttcaccaca
ctgatcaccggtcagatgggacttttttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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