KEGG   Yersinia pestis Angola: YpAngola_A3492
Entry
YpAngola_A3492    CDS       T00635                                 
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
ypg  Yersinia pestis Angola
Pathway
ypg03030  DNA replication
ypg03430  Mismatch repair
ypg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ypg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    YpAngola_A3492 (holB)
   03430 Mismatch repair
    YpAngola_A3492 (holB)
   03440 Homologous recombination
    YpAngola_A3492 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ypg03032]
    YpAngola_A3492 (holB)
   03400 DNA repair and recombination proteins [BR:ypg03400]
    YpAngola_A3492 (holB)
Enzymes [BR:ypg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     YpAngola_A3492 (holB)
DNA replication proteins [BR:ypg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     YpAngola_A3492 (holB)
DNA repair and recombination proteins [BR:ypg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     YpAngola_A3492 (holB)
SSDB
Motif
Pfam: DNApol3-delta_C DNA_pol3_delta2 HolB_lid DUF6587
Other DBs
NCBI-ProteinID: ABX87699
Position
complement(3707762..3708769)
AA seq 335 aa
MNWYPWLNAPYRQLVGQHSTGRGHHALLLHSLPGNGEDALIYALSRWLMCQQRQGEKSCG
ECHSCRLMLAGNHPDWYVLTPEKGKSSIGVELVRQLIDKLYSHAQQGGAKVVWLPHAEVL
TDAAANALLKTLEEPPEKTYFLLDCHQPASLLATLRSRCFYWYLACPDTAICLQWRKRQI
PVEPVAMLAALKLSEGAPLAAERLLQPERWSIRSALCSGLREALNRSDLLSLLPQLNHDD
AAERLQWLSSLLLDALKWQQGAGEFAVNQDQLPLVQQLAHIAATPVLLQLAKQLAHCRHQ
LLSVVGVNRELLLTEQLLSWETALSTGTYSTLPSL
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgaattggtatccgtggcttaacgccccttaccgccaactggttgggcagcacagtacc
gggcgcgggcaccatgcattactgctgcattcattacccggtaatggcgaagacgcattg
atttatgcgctgagtcgttggctaatgtgtcagcagcggcaaggtgagaagagttgtggt
gaatgccatagctgccgcttgatgttggcaggcaaccaccccgattggtatgtactgaca
ccggaaaaaggcaaaagcagtatcggggttgagttggttcgtcaattgattgataaactg
tattcccatgctcaacaaggcggtgcaaaggtggtgtggttgccacatgccgaagtgttg
accgatgccgctgctaatgccctgctaaaaacgctggaagagcctccagagaagacctat
tttctgttggattgccaccaacccgccagcttgctggctacactgcgtagccgctgtttt
tattggtatctggcttgcccggatacggctatttgtctgcaatggcgtaagcggcagatc
cctgtggagcccgttgcgatgttggcggccctgaaattgagtgaaggcgcaccgctggcg
gctgagcggttgctccaaccagagcgttggagtatccgcagcgctttgtgtagcgggcta
cgcgaggcactgaaccgctcagacttgctgtcgttgttaccacaacttaaccatgatgat
gctgctgaacgtctgcaatggctctcttcactgctcttggatgcgttgaagtggcagcaa
ggggcaggggagtttgcggttaatcaggatcaattacccttagtgcaacagttggcacac
atcgcggcgacgccagtattacttcagttggctaagcaactggctcattgccgccatcaa
ttattatctgtggtaggtgttaatcgtgaattgttactcactgagcaactgcttagctgg
gaaacagcactgtccacgggtacttattccaccttaccttcgttgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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