KEGG   Yersinia pestis 91001 (biovar Microtus): YP_3131
Entry
YP_3131           CDS       T00165                                 
Symbol
lpd
Name
(GenBank) putative pyridine nucleotide-disulfide oxidoreductase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ypm  Yersinia pestis 91001 (biovar Microtus)
Pathway
ypm00010  Glycolysis / Gluconeogenesis
ypm00020  Citrate cycle (TCA cycle)
ypm00260  Glycine, serine and threonine metabolism
ypm00280  Valine, leucine and isoleucine degradation
ypm00310  Lysine degradation
ypm00380  Tryptophan metabolism
ypm00620  Pyruvate metabolism
ypm00630  Glyoxylate and dicarboxylate metabolism
ypm00640  Propanoate metabolism
ypm00785  Lipoic acid metabolism
ypm01100  Metabolic pathways
ypm01110  Biosynthesis of secondary metabolites
ypm01120  Microbial metabolism in diverse environments
ypm01200  Carbon metabolism
ypm01210  2-Oxocarboxylic acid metabolism
ypm01240  Biosynthesis of cofactors
Module
ypm_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ypm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ypm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ypm_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ypm00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    YP_3131 (lpd)
   00020 Citrate cycle (TCA cycle)
    YP_3131 (lpd)
   00620 Pyruvate metabolism
    YP_3131 (lpd)
   00630 Glyoxylate and dicarboxylate metabolism
    YP_3131 (lpd)
   00640 Propanoate metabolism
    YP_3131 (lpd)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    YP_3131 (lpd)
   00280 Valine, leucine and isoleucine degradation
    YP_3131 (lpd)
   00310 Lysine degradation
    YP_3131 (lpd)
   00380 Tryptophan metabolism
    YP_3131 (lpd)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    YP_3131 (lpd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ypm04147]
    YP_3131 (lpd)
Enzymes [BR:ypm01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     YP_3131 (lpd)
Exosome [BR:ypm04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   YP_3131 (lpd)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox_3 GIDA Pyr_redox Lys_Orn_oxgnase AlaDh_PNT_C DAO FAD_binding_2 FAD_oxidored
Other DBs
NCBI-ProteinID: AAS63301
UniProt: A0A5K1VLA0
Position
complement(3490271..3491734)
AA seq 487 aa
MKTLNVDVAVIGGGTAGLGAYRAAKLLTPNVVMIEGGEYGTTCARVGCMPSKLLIAAAEA
VHQIEKAPGFGIHPQGKPLINGREVMDRVKRERDRFVGFVLEGVETIPAADKIQGYARFI
DDNTLQVDDHTQLTSQKIIAQRIVIATGSRPSWPASWNELGDRLIINDDVFNWDDLPESV
AVFGPGVIGLELGQALHRLGVQVKMFGVGGAVGPLTDSIVRDYAAKTLGDEFYLDPDVKV
ELMQREGDKVFIRYLDKSGRPQEIMVDYVLAATGRRPNVDKLGLENTSLILDERGVPQAD
RLTMQTNVPHIFIAGDASNQLPLLHEASDQARIAGVNAGGFPEVVPGLRRSPISVVFSDP
QIAMVGATFRELAQKFSACGCFEIGEVSFENQGRSRVMLKNKGILRIYGEQGTGRFLGAE
MMGPSAEHIAHLLAWAHQQQMTIDQMLDMPFYHPVIEEGLRTALRDLQSKLKLGADEAER
CLRCPGE
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgaaaaccttaaacgttgatgtcgctgttattggcggcggaacggccggactgggcgct
tatcgcgcggccaaactgttgacccccaacgtagtgatgattgaaggtggtgaatatggt
accacctgcgcacgcgtcggctgcatgccatccaaactattgattgcggcggctgaagcc
gtccaccagatagaaaaagcgcccggatttggtattcacccacaaggtaagcccctgatt
aatggccgtgaagtcatggaccgcgttaagcgtgaacgtgaccgttttgtgggcttcgta
ttggaaggcgtagagaccattcctgcggccgataaaattcaaggttatgcccgttttatt
gatgataacaccctgcaagttgatgatcacacgcagcttacttcacaaaaaatcattgcg
cagcggatcgtgattgcgacaggttcccgcccaagctggcccgcctcttggaatgagcta
ggtgaccggttgattattaatgatgacgtctttaattgggacgatctgccagaatctgtg
gcagtttttggcccaggcgttattggcttagaacttggtcaggcactgcaccggttaggt
gtccaggtaaaaatgtttggtgtcggtggtgccgttggcccgctgaccgacagtatcgtg
cgtgactacgcagcaaaaacgttgggtgatgagttctatcttgatcccgatgtaaaagtt
gagctgatgcaacgtgagggagataaagtctttatccgttatctggataaaagcggtagg
ccacaggagattatggtggactacgtcttagccgccacgggccgccgccctaatgtagat
aaattggggctggagaatacgtcactcattctggatgaacgcggagtgccgcaggcagac
cgcctgaccatgcaaaccaacgtgccgcatatttttattgcaggtgatgccagcaatcag
ttgccattactgcatgaagccagcgatcaggcacgtattgccggtgtaaatgcgggagga
ttccctgaggttgtacccggtttacgccgtagcccaatttcagtcgtgttctctgaccca
caaattgccatggtgggggcaaccttccgtgagctagcacaaaaattcagcgcttgtggt
tgctttgagattggcgaagtctcctttgagaatcaaggtcgctcgcgggtgatgctaaaa
aacaaaggcattttacgcatttatggcgaacagggcactggccgattcttaggggcagag
atgatggggccaagtgcggagcacatcgcccacttactggcatgggcgcatcagcaacaa
atgaccatcgaccagatgctcgatatgccgttttatcatccggtcattgaagaaggcctg
cgtaccgcattgcgtgatttgcaatctaagttaaagctgggcgctgatgaagcggagcgc
tgcctacgctgccctggcgaataa

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