KEGG   Yersinia pestis Nepal516 (biovar Antiqua): YPN_0050
Entry
YPN_0050          CDS       T00370                                 
Name
(GenBank) pyridine nucleotide-disulphide oxidoreductase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ypn  Yersinia pestis Nepal516 (biovar Antiqua)
Pathway
ypn00010  Glycolysis / Gluconeogenesis
ypn00020  Citrate cycle (TCA cycle)
ypn00260  Glycine, serine and threonine metabolism
ypn00280  Valine, leucine and isoleucine degradation
ypn00310  Lysine degradation
ypn00380  Tryptophan metabolism
ypn00620  Pyruvate metabolism
ypn00630  Glyoxylate and dicarboxylate metabolism
ypn00640  Propanoate metabolism
ypn00785  Lipoic acid metabolism
ypn01100  Metabolic pathways
ypn01110  Biosynthesis of secondary metabolites
ypn01120  Microbial metabolism in diverse environments
ypn01200  Carbon metabolism
ypn01210  2-Oxocarboxylic acid metabolism
ypn01240  Biosynthesis of cofactors
Module
ypn_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ypn_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ypn_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ypn_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ypn00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    YPN_0050
   00020 Citrate cycle (TCA cycle)
    YPN_0050
   00620 Pyruvate metabolism
    YPN_0050
   00630 Glyoxylate and dicarboxylate metabolism
    YPN_0050
   00640 Propanoate metabolism
    YPN_0050
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    YPN_0050
   00280 Valine, leucine and isoleucine degradation
    YPN_0050
   00310 Lysine degradation
    YPN_0050
   00380 Tryptophan metabolism
    YPN_0050
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    YPN_0050
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ypn04147]
    YPN_0050
Enzymes [BR:ypn01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     YPN_0050
Exosome [BR:ypn04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   YPN_0050
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox_3 GIDA Pyr_redox Lys_Orn_oxgnase AlaDh_PNT_C DAO FAD_binding_2 FAD_oxidored
Other DBs
NCBI-ProteinID: ABG16383
UniProt: A0A0H2YF48
Position
complement(73123..74586)
AA seq 487 aa
MKTLNVDVAVIGGGTAGLGAYRAAKLLTPNVVMIEGGEYGTTCARVGCMPSKLLIAAAEA
VHQIEKAPGFGIHPQGKPLINGREVMDRVKRERDRFVGFVLESVETIPAADKIQGYARFI
DDNTLQVDDHTQLTSQKIIAQRIVIATGSRPSWPASWNELGDRLIINDDVFNWDDLPESV
AVFGPGVIGLELGQALHRLGVQVKMFGVGGAVGPLTDSIVRDYAAKTLGDEFYLDPDVKV
ELMQREGDKVFIRYLDKSGRPQEIMVDYVLAATGRRPNVDKLGLENTSLILDERGVPQAD
RLTMQTNVPHIFIAGDASNQLPLLHEASDQARIAGVNAGGFPEVVPGLRRSPISVVFSDP
QIAMVGATFRELAQKFSACGCFEIGEVSFENQGRSRVMLKNKGILRIYGEQGTGRFLGAE
MMGPSAEHIAHLLAWAHQQQMTIDQMLDMPFYHPVIEEGLRTALRDLQSKLKLGADEAER
CLRCPGE
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgaaaaccttaaacgttgatgtcgctgttattggcggcggaacggccggactgggcgct
tatcgcgcggccaaactgttgacccccaacgtagtgatgattgaaggtggtgaatatggt
accacctgcgcacgcgtcggctgcatgccatccaaactattgattgcggcggctgaagcc
gtccaccagatagaaaaagcgcccggatttggtattcacccacaaggtaagcccctgatt
aatggccgtgaagtcatggaccgcgttaagcgtgaacgtgaccgttttgtgggcttcgta
ttggaaagcgtagagaccattcctgcggccgataaaattcaaggttatgcccgttttatt
gatgataacaccctgcaagttgatgatcacacgcagcttacttcacaaaaaatcattgcg
cagcggatcgtgattgcgacaggttcccgcccaagctggcccgcctcttggaatgagcta
ggtgaccggttgattattaatgatgacgtctttaattgggacgatctgccagaatctgtg
gcagtttttggcccaggcgttattggcttagaacttggtcaggcactgcaccggttaggt
gtccaggtaaaaatgtttggtgtcggtggtgccgttggcccgctgaccgacagtatcgtg
cgtgactacgcagcaaaaacgttgggtgatgagttctatcttgatcccgatgtaaaagtt
gagctgatgcaacgtgagggagataaagtctttatccgttatctggataaaagcggtagg
ccacaggagattatggtggactacgtcttagccgccacgggccgccgccctaatgtagat
aaattggggctggagaatacgtcactcattctggatgaacgcggagtgccgcaggcagac
cgcctgaccatgcaaaccaacgtgccgcatatttttattgcaggtgatgccagcaatcag
ttgccattactgcatgaagccagcgatcaggcacgtattgccggtgtaaatgcgggagga
ttccctgaggttgtacccggtttacgccgtagcccaatttcagtcgtgttctctgaccca
caaattgccatggtgggggcaaccttccgtgagctagcacaaaaattcagcgcttgtggt
tgctttgagattggcgaagtctcctttgagaatcaaggtcgctcgcgggtgatgctaaaa
aacaaaggcattttacgcatttatggcgaacagggcactggccgattcttaggggcagag
atgatggggccaagtgcggagcacatcgcccacttactggcatgggcgcatcagcaacaa
atgaccatcgaccagatgctcgatatgccgttttatcatccggtcattgaagaaggcctg
cgtaccgcattgcgtgatttgcaatctaagttaaagctgggcgctgatgaagcggagcgc
tgcctacgctgccctggcgaataa

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