KEGG   Yersinia pestis Nepal516 (biovar Antiqua): YPN_2347
Entry
YPN_2347          CDS       T00370                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:3.6.4.13]
Organism
ypn  Yersinia pestis Nepal516 (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:ypn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ypn03009]
    YPN_2347
Ribosome biogenesis [BR:ypn03009]
 Prokaryotic type
  rRNA helicases
   YPN_2347
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 Helicase_C_2 P-loop_SecA
Other DBs
NCBI-ProteinID: ABG18675
UniProt: A0A0H2YJH4
Position
complement(2628036..2629418)
AA seq 460 aa
MSTTSFSSLTLPAEQLSNLNELGYTEMTPVQAAVLPAILNGQDVRAKAKTGSGKTAAFGI
GLLDKIAVGEFVTQALVLCPTRELADQVSKELRRLARFTQNIKILTLCGGQPMGHQLDSL
VHAPHIVVGTPGRIQEHLRKKTLVLDELKTLVLDEADRMLDMGFSDAIDDVIAYTPPQRQ
TLLFSATYPSGIEQISARVQRQPLNVEVGDTDEEPAIEQVFFETTREKRLPLLISVLSHY
QPASCVVFCNTKKDCQSVYESLESRGISVLALHGDLEQRDRDQVLVRFANRSCRVLVATD
VAARGLDIKDLELVINFELAFDPEIHIHRIGRTGRAGMSGLAVSLCTPQEMVRAHTIEDY
LQIKLKWTPAEQVSRSTNIMLEPEMVTLCIDGGRKAKIRPGDILGALTGDAGLTAADVGK
IDMFPVHAYVAIRKASAKRALQQLQQGKIKGKNCKARLLK
NT seq 1383 nt   +upstreamnt  +downstreamnt
gtgagcacaacttccttttcttccctgacactgcctgctgagcagttgtccaatcttaat
gaacttggctataccgagatgaccccggtacaagctgcggtgttacccgcaatcctcaac
gggcaggatgtccgggcgaaggccaaaaccggcagcggtaaaacagccgcatttggcatt
ggtttgctggacaaaatagcggtaggggaatttgttacccaagcgctggtattgtgccca
acccgagaattagcagaccaggtcagtaaagagctgcgccgtttagcacggtttacacaa
aatattaaaattctgaccctgtgtggcggccaaccgatgggccaccaattagattctctg
gtccatgcaccgcacattgtcgtgggtacgccagggcgtattcaggaacatctgcgcaag
aaaacgctggtacttgatgagttgaaaacgctggtgttggatgaagctgatcgcatgttg
gatatgggtttttccgatgccattgatgacgtgattgcgtatacccctccacagcggcaa
accttgttgttctctgccacctacccatcaggtattgagcagatcagtgcacgagttcag
cgccaaccattgaatgttgaagtgggtgataccgatgaagagcccgctattgaacaggtg
ttttttgaaacgactcgtgagaaacggctgccactgctgatctcagttctgagccattac
cagccggcctcttgtgtggtgttctgtaacaccaaaaaagattgtcagagcgtttatgag
tcactggaatcacgtggtatcagtgtcttggctttgcacggggatttagaacagcgtgat
cgtgatcaggttctggtgcgttttgccaatcgtagctgccgtgtgttggtggcgaccgat
gttgctgctcgtggtttagatatcaaggatctggagctggtcattaactttgaattggcg
tttgatcccgaaattcacatacaccgcattggccgtaccgggcgcgcagggatgagcggc
ctggccgttagcctatgtacgccacaggaaatggtacgtgcccataccatcgaagattat
ctgcaaataaaattgaaatggacacctgcggaacaggttagccgtagcaccaacatcatg
ctggaaccagaaatggtgacgttatgcattgacggggggcgcaaagctaaaattcgccct
ggtgacattctcggggcattaaccggtgatgcagggttaaccgccgcagatgtgggtaag
attgatatgttcccggttcatgcctatgtggctatccgtaaagccagtgccaagcgtgcg
ttgcaacaattgcagcaaggcaaaatcaaaggtaaaaactgtaaagcccgtctattaaaa
taa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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