KEGG Y.pestis_Nepal516: YPN

Yersinia pestis Nepal516 (biovar Antiqua): YPN_3723

Entry

YPN_3723 CDS Y.pestis_Nepal516

Definition D-isomer specific 2-hydroxyacid dehydrogenase

Orthology K00090 gluconate 2-dehydrogenase [EC:1.1.1.215]

Pathway ypn00030 Pentose phosphate pathway
ypn01100 Metabolic pathways

Class Metabolism; Carbohydrate Metabolism; Pentose phosphate pathway
[PATH:ypn00030]

SSDB

Motif Pfam: 2-Hacid_dh_C 2-Hacid_dh NAD_binding_2 F420_oxidored
PROSITE: D_2_HYDROXYACID_DH_1 D_2_HYDROXYACID_DH_3

Other DBs NCBI-GI: 108813883
NCBI-GeneID: 4126140
JGI: YPN3723
UniProt: Q1CD80

Position 4273455..4274435

AA seq 326 aa
MKPSIVLYKSIPTDLHQRLAQHFTVNSFDGLTPDNQPELLAALQQAEGLIGSGGKIDQDF
LQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVE
LAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPH
EAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKMKSSAILINAGRGPV
VDEQTLIAALQDGTIHAAGLDVFEQEPLPVDSPLLTLRNVVAVPHIGSATHETRYNMAAC
AVDNLINALTGTVKENCVNPQVLITH

NT seq 981 nt +upstreamnt +downstreamnt
atgaaaccttctattgtgttgtacaaaagtattcccaccgatctgcatcagcgtttagca
caacattttaccgtaaacagttttgatggcttaacaccggataatcagccggagctatta
gctgccctacaacaagcggaaggattaattggttctggcggtaaaatcgatcaagacttt
ttacaattagcgccaaatttacgggctgcctccaccatttctgtcggttatgacaatttc
gatgttgaagccctgagtcaacggggcattgcactgatgcacacgcccaccgtgctaaca
gagaccgtggccgataccatgatggcgctcatgttgtctacggcgcgtcgggtggttgaa
ctggcggagcgggtgaaagccggtgaatggcaagagagcattggtgatgactggttcggt
gttgacgttcaccataaaaccattggtattctgggcatgggccgtattggcatggcgtta
gcccaacgggcacattttggtttcagtatgcccgtgctgtacaccagccgccgcccccac
gaagcagcagaacagcgttttggtgcccgccactgctcactggatactctgctagctgag
gccgatttcctgtgtattaccttgccgatgacagaacagacttatcatatgattggccgt
gaacaactggcaaaaatgaaatccagtgccattttgattaatgcgggccgtggacccgtg
gtggatgaacagacgctgattgcagccttacaagatggcacgatccacgccgcggggctg
gatgtctttgagcaagagccgctgcctgtggattcgccactcctgacgctacgtaatgtg
gttgctgtaccacacattggttctgccacccatgaaacccgctacaacatggcggcttgt
gcagttgataacctcatcaatgccctcaccggcacggtaaaagagaactgtgtaaaccca
caggtgctaataactcactaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (3)   
   JGI-YPN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (4)   
   PROSITE (2)   
All databases (22)

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