KEGG   Yersinia pestis Nepal516 (biovar Antiqua): YPN_3806
Entry
YPN_3806          CDS       T00370                                 
Name
(GenBank) RNAse PH
  KO
K00989  ribonuclease PH [EC:2.7.7.56]
Organism
ypn  Yersinia pestis Nepal516 (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:ypn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ypn03016]
    YPN_3806
Enzymes [BR:ypn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.56  tRNA nucleotidyltransferase
     YPN_3806
Transfer RNA biogenesis [BR:ypn03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    YPN_3806
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: ABG20133
UniProt: Q1CCZ7
Position
complement(4355562..4356278)
AA seq 238 aa
MRPADRAAQQVRPLTLTRNYTKHAEGSVLVEFGDTKVLCTATVEEGVPRFLKGQGQGWIT
AEYGMLPRSTHSRNAREAAKGKQGGRTLEIQRLIARSLRAAVDLKKLGEFTITLDCDVLQ
ADGGTRTASISGACVALADALNKLVASGKLKANPMKGLVAAVSVGIVKGEALCDLEYVED
SAAETDMNVVMMEDGRMIEVQGTAEGEPFSHEELLALLDLARGGIETIFQAQKAALES
NT seq 717 nt   +upstreamnt  +downstreamnt
atgcgtccagcagaccgagcagctcaacaagttcgcccactgactttgacccgtaattac
acgaaacacgctgaaggttcagtgttggttgaattcggcgataccaaagtattgtgtacc
gccacagttgaagaaggtgttccacgctttctgaaaggccagggccaagggtggataacg
gcagaatatggcatgttgcctcgttcgacccatagccgtaatgcgcgcgaagccgcaaaa
ggtaaacaaggtgggcgtactcttgaaatccaacgtctgatcgcccgttctttacgtgca
gcggtcgatttgaaaaagttgggtgaatttaccatcaccttagactgcgatgtattgcaa
gcggatggtggcacccgtaccgcctcaatcagtggtgcttgtgtagcattggctgacgcg
ctgaacaaactggttgctagtggtaaattgaaagctaacccgatgaagggcctggttgct
gctgtgtctgtcgggatcgttaaaggcgaggctctttgcgatctggaatacgtagaagat
tctgcggcagaaacagatatgaatgtggtgatgatggaagatggccggatgattgaggtg
caaggcaccgctgaaggtgagccgttcagtcacgaagaattattggcgttgctggatctg
gcccgcggagggatagaaaccatcttccaggcgcagaaggcggcattggaatcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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