KEGG T00505: YPDSF

Yersinia pestis Pestoides F: YPDSF_1792

Entry

YPDSF_1792 CDS T00505

Gene name

lacZ

Definition

beta-D-galactosidase (EC:3.2.1.23)

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

ypp Yersinia pestis Pestoides F

Pathway

ypp00052	Galactose metabolism
ypp00511	Other glycan degradation
ypp00600	Sphingolipid metabolism
ypp01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:ypp00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:ypp00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:ypp00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_C Bgal_small_N Glyco_hydro_2_N Glyco_hydro_2 ATP_sub_h

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2026725..2029907

AA seq 1060 aa
MTSQEKVPLQVQLSLPQILSRRDWENPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQQQ
TLNGLWSFSYFTQPEAVPEHWVRCDLAEAKPLPVPANWQLHGYDAPIYTNIQYPIPVNPP
RVPDLNPTGCYSRDFTLEPSWLASGKTRIIFDGVSSAFYLWCNGQWVGYSQDSRLPAEFD
LTPYLQAGSNRIAVLVLRWSDGSYLEDQDMWRMSGIFRDVKLLHKPEIHLRDIHIMTHLS
PEFTSANLEVMAAVNIPSLQLNDPQVTGSYQLRVQLWLADKLVASLQQPLGTQAIDERGP
YTDRTQLVLRIDQPLLWSAEQPTLYRAVVSLLNHQQELIEAEAYDVGFRQVAIHQGLLKI
NGKAVLIRGVNRHEHHPQTGQAIDEESLLQDILLMKQHNFNAVRCSHYPNHPLWYRLCDR
YGLYVVDEANIETHGMQPMSRLSDDPSWFSAFSERVTRMVQRDRNHPCIIIWSLGNESGH
GATHDALYRWIKTNDPTRPVQYEGGGANTLATDILCPMYARVDEDQPFPAVPKWSIKKWI
GLPNESRPLILCEYAHAMGNSFGGFARYWQAFRQYPRLQGGFIWDWVDQSLTHHNDHGQP
YWAYGGDFGDTPNDRQFCMNGLVFPDRSPHPSLYEAQCAQQFFQFSLLSTTPLVINITSE
YLFRESDNEQLYWRIMLEGESVLEGSQPLNLSPESSQCYRLAEKLPTLNKPGQLWLNVEI
RQPKETPWSPAQHRSAWHQWRLPQPLFSPSSDLTNATAHYAPQLQHNLQLQHDLQLQQDE
QHIKVTYQQQCWQFSRQTGRLAQWWVADKPMLLRPLQDQFVRAPLDNDIGISEATHIDPN
AWVERWKKAGMYQLQQRCLSLHVDHLSHSVQISAEYGYEFEQEPLLHSHWVYRFDRHGRM
TIDVNVRIATSLPAPARIGMCCQLADISPTVEWLGLGPHENYPDRQLAAQYGHWSLPLEQ
MHTAYIFPSENGLRCNTHTLNYGRWTLTGDFHFGISRYSTQQLMVTSHQHLLEPEEGTWL
NIDGFHMGVGGDDSWSPSVHIDDILTRETYQYQICWQYKV

NT seq 3183 nt +upstreamnt +downstreamnt
atgacgtcacaggaaaaggtaccactccaggtgcaactgagtcttccccagattttgtcc
cgccgagattgggaaaacccgcagatcacacagtatcatcgcctggaggcccacccgcct
tttcacagttggcgtgatgtagaatctgcccagaaggatcgtccttcaccacagcaacaa
acactcaatgggctatggtcattcagctatttcacacaacctgaagcggtacccgagcac
tgggtgaggtgcgatttagccgaggcaaagccgctccctgtaccggctaactggcaactt
catggttatgacgcaccaatttacaccaatatacaataccctattcccgtcaacccacca
cgggtcccggatctaaatccaacgggttgctattcccgtgatttcacgttagagccaagc
tggttggcatcgggtaagactcgcattatttttgacggtgtcagttctgcattttatctg
tggtgtaatgggcaatgggtaggttattcacaagacagccgcctacctgctgagttcgat
ctcaccccctatttgcaggctggcagtaaccgtatcgcagttttagttctgcgctggagt
gatgggagttatcttgaagatcaagatatgtggcgtatgagcggaatttttcgtgatgtg
aaattgttgcataaacccgagattcacttacgggatatccacatcatgacgcatctatcc
cctgaattcacctctgcaaatttagaggtaatggcggccgtcaatatcccctctctacag
ctcaatgatccgcaggtgaccggatcctatcagctccgtgtacaactttggttagccgat
aaattggtcgccagtttacaacagcctttaggcacccaagccattgatgaacgaggtcct
tatactgatcgtacccagctagtattgcgaatagatcagcctctgctctggagtgccgag
cagccgacgctataccgagccgtggtttccttgctcaatcatcagcaagaattgattgag
gccgaagcctatgacgtgggtttcaggcaagtggcaatccatcaaggcttgcttaaaatc
aatggcaaagcggtgctgatcagaggggtgaatcgacatgaacatcacccgcaaacaggt
caggccattgatgaagagagtctgttgcaagacattttattaatgaaacagcataatttt
aatgctgtgcgctgctcccactatcccaatcatcctttatggtaccgcctttgtgaccgc
tatggtttgtatgtggttgatgaagcgaatattgagacacacggtatgcagcccatgagc
aggctgtccgatgacccaagctggttttcagctttcagtgaacgggtgacgcggatggtt
cagcgagatcgcaaccatccatgcattattatctggtcactgggcaatgaatcaggccat
ggcgcaacccatgatgccctctatcgttggataaaaaccaatgaccccacccgccctgtg
caatatgaagggggcggtgccaacaccttagcgaccgacattctgtgtccgatgtatgcc
cgtgttgatgaagaccagccctttcctgccgtccccaagtggtcaatcaaaaaatggatt
ggcttaccgaatgaatctcgccccttgatcctatgtgaatacgcccatgcgatgggcaat
agcttcggtggatttgcccgctattggcaggcatttcgtcagtacccgcgcttacagggc
gggtttatttgggactgggtagaccaaagtctgactcatcataatgaccatggtcagcct
tattgggcgtatgggggtgattttggtgatactcccaatgaccgccagttctgcatgaac
ggattagtcttccctgaccgcagcccgcacccgagcctttatgaagcgcagtgcgcacag
caattcttccaattttcgttgctgagtacgaccccgttggtgatcaacattaccagtgaa
tatttgttccgagagagtgataacgaacaattatattggcggataatgttagagggagaa
tccgtgttggagggtagccaacccctgaatttgtcgcctgaaagctcacagtgctacagg
ttggcagagaaattacccacgcttaataaacctgggcagctatggctgaatgttgagata
aggcaaccaaaagaaaccccgtggtcccctgctcaacatcgcagtgcctggcatcaatgg
cgcttaccacaaccactcttttcgccgtccagtgatctgaccaatgctacagcgcattat
gcccctcaactgcaacataaccttcaactacaacatgaccttcaactgcagcaagatgaa
cagcatattaaggtgacttatcagcaacaatgctggcaattcagtcgtcaaacggggcgg
ttggcgcaatggtgggtggcggataaaccgatgctactgcgcccactacaagatcaattt
gtgcgtgcgccgctggataacgatatcggtatcagcgaagctacgcatattgaccccaat
gcttgggttgagcgctggaagaaagccggaatgtatcaactccagcaacgctgcctctct
ctacacgtagatcatttatcccattcagtacaaatcagtgccgaatacggttatgaattc
gagcaagagcccttgctacacagccattgggtataccgttttgaccgacatggccgtatg
accattgatgttaacgtccgtatcgctacctcactccctgcgccagccagaattggcatg
tgttgccaactggctgatatctcacctacggttgaatggctagggttggggccacatgaa
aactaccctgatcggcagcttgcagcacaatatgggcactggtccctgccattagagcag
atgcacaccgcgtatattttccccagtgagaatggcttgcgctgcaatacccatacgctg
aattatggccgctggacgttaacgggcgatttccactttggtataagtcgctacagcacc
cagcaactgatggtgacctcccatcaacatctattggaacccgaagagggcacctggctc
aatattgatggtttccatatgggggtgggcggtgatgattcatggagcccgagtgttcac
attgatgacatactcacccgtgaaacctatcagtaccaaatctgttggcaatacaaggtg
taa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-YPP (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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