KEGG   Yersinia pseudotuberculosis ATCC 6904: DJ40_2259
Entry
DJ40_2259         CDS       T03307                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:3.6.4.13]
Organism
ypq  Yersinia pseudotuberculosis ATCC 6904
Pathway
ypq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ypq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DJ40_2259
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ypq03019]
    DJ40_2259
Enzymes [BR:ypq01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     DJ40_2259
Messenger RNA biogenesis [BR:ypq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DJ40_2259
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C AAA_22 CCDC138_C
Other DBs
NCBI-ProteinID: AIN13493
Position
2487458..2488744
AA seq 428 aa
MSKTHLTEQKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKT
LAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPSVDKRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPLQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRCIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILE
DFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRTGESGHSISLA
CEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRLARTRTGNGPRRNSAPRRSGAP
RNNRKRPG
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgagcaaaacacacttgactgaacagaagttttccgacttcgccctgcacccgctagtt
gttgaagcccttgaaaacaaagggtttcagtattgcacgccgattcaggcgttagcattg
ccactcaccctctctgggcgtgatgtagcaggtcaggcgcaaaccggtacaggcaagacg
ctggcattcttggcgtctactttccattatttgctttctcacccagcagaagagggtcgc
cagactaatcaaccacgcgcattaattatggcaccaacgcgcgaattagccgtgcaaatt
cactccgatgcagaatcactttcccaggtaaccgggctgaagttaggtctggcttatggt
ggggatggctacgataaacagcttaaagtgctggaaagtggcgttgatatcttgatcggt
acaacaggccgtttaatcgattacgcgaaacaaaattatattaacctcggtgcgattcaa
gtcgtggtattggatgaagcggatcgcatgtacgatctaggctttattaaagatatccgc
tggctgttccgccgtatgccttccgttgataaacgtttaaatatgctgttttctgccact
ctctcgtatcgggtacgtgaattggcattcgaacaaatgaataatgcagaatatgttgaa
gtggaaccgttacaaaaaaccggtcaccgcatcaaagaagagctgttctatccttcaaat
gaagaaaaaatgcgtctgttacagacgttaattgaagaagaatggcctgatcgctgtatt
atttttgctaataccaaacaccgttgtgaagagatctgggggcatttggctgctgatggt
caccgcgtcggtttattgacgggtgatgttgctcagaaaaaacgcctgcgtattctcgaa
gatttcaccaagggcgatttggatattctggttgccaccgatgttgctgcccgtggttta
cacattccattagtgacccacgtcttcaactatgacctgccagatgactgtgaagattac
gttcaccgcattggccgtactggccgtactggcgagagtggtcactccatcagtctggcc
tgcgaagagtatgcattaaacttgccagcgattgagacctatacgggccatagcatcccg
gtaagcaaatataacagtgacgcgctattaactgatctaccagcgcctaaacgcctggcc
cgtacccgcaccgggaatggcccacgccgtaattctgccccacgccgcagtggagcacca
cggaataaccgtaagcgaccaggctga

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