KEGG   Yersinia pseudotuberculosis ATCC 6904: DJ40_3990
Entry
DJ40_3990         CDS       T03307                                 
Symbol
rlmF
Name
(GenBank) ribosomal RNA large subunit methyltransferase F
  KO
K06970  23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
Organism
ypq  Yersinia pseudotuberculosis ATCC 6904
Brite
KEGG Orthology (KO) [BR:ypq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ypq03009]
    DJ40_3990 (rlmF)
Enzymes [BR:ypq01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.181  23S rRNA (adenine1618-N6)-methyltransferase
     DJ40_3990 (rlmF)
Ribosome biogenesis [BR:ypq03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    DJ40_3990 (rlmF)
SSDB
Motif
Pfam: Methyltransf_10 MTS Methyltransf_12
Other DBs
NCBI-ProteinID: AIN15175
Position
4479279..4480244
AA seq 321 aa
MENKKVFPKEKSGLHPRNRHRSRYDFDALSVSCPELIPFLAPTAYGDISVDFADPLAVKM
LNKALLKHFYGIEYWDIPADSLCPPIPGRADYVHHLADLLASCNGEVIPKGKNIALLDIG
VGANCIYPIIGQREYGWRFTGTDIDSHALSAAKMVVSMNPTLKNTLRLKQQKDPHAIFEG
VWAVNERYDATLCNPPFHGSAEEAAATTRRKLHKLGKNEVAAKPVQNFGGKNSELWCEGG
EEGFVSRMVAESVAKAQNCFWFTSLISKKTTLPAIYHALRYVKAVEVRTIEMAQGQKVSR
FVVWTFLTPEQQAAWVAERWA
NT seq 966 nt   +upstreamnt  +downstreamnt
atggaaaataaaaaagtattccccaaagaaaaaagcggattgcatccccgaaatcgtcat
cgctcacgctatgattttgatgcgctttcagtgagttgccctgagctaatcccttttttg
gccccgaccgcctatggtgatatttctgtcgattttgctgatccattagcagtaaaaatg
ttgaataaggcattattaaaacatttctatggcattgaatattgggatattccagccgat
tctttatgtcctcccattcctgggcgtgccgattacgtgcaccatctggccgatctatta
gccagttgcaatggcgaggtgatccctaagggcaagaatattgcgttgctggatattggc
gtcggcgctaactgtatttatccaattattggtcagcgggagtacggctggcgctttacc
ggtacggatattgactcacacgcgctcagtgcggcaaaaatggtggtgtcgatgaatccg
accctgaaaaataccttgcgcctgaagcagcaaaaagatccacacgctatttttgaaggg
gtgtgggcggtgaatgagcgttacgatgcgacgctgtgtaacccgccattccatggttca
gcagaagaagcggcggccaccactcgccgtaaattgcacaaactggggaaaaatgaagtc
gctgcaaagccagtacagaacttcggtggtaaaaacagtgagttatggtgtgaaggtggg
gaggaagggtttgttagccgcatggtggcagagagcgtagcgaaagcgcagaactgcttc
tggtttacctcattgatttccaagaagaccacgttaccggcgatttatcatgcgttaaga
tatgtgaaggcagttgaggtgcgcactattgagatggcgcaagggcaaaaagtcagtcgg
tttgtggtctggacgttcctgacgcccgagcagcaagccgcgtgggttgcagagcgctgg
gcataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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