KEGG   Yersinia pseudotuberculosis IP 32953 (serotype I): YPTB0960
Entry
YPTB0960          CDS       T00195                                 
Symbol
clpX
Name
(GenBank) specificity component of clpA-clpP ATP-dependent serine protease, chaperone
  KO
K03544  ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
yps  Yersinia pseudotuberculosis IP 32953 (serotype I)
Brite
KEGG Orthology (KO) [BR:yps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:yps03110]
    YPTB0960 (clpX)
Chaperones and folding catalysts [BR:yps03110]
 Heat shock proteins
  HSP100
   YPTB0960 (clpX)
SSDB
Motif
Pfam: AAA_2 zf-C4_ClpX AAA ClpB_D2-small Mg_chelatase AAA_5 AAA_22 RuvB_N MCM AAA_7 AAA_14 Sigma54_activ_2 AAA_16 Sigma54_activat AAA_18 AAA_24 NACHT TIP49 IstB_IS21 T2SSE ABC_tran DEAD AAA_33 AAA_21 ResIII nSTAND3 AAA_23 AAA_28 AAA_29 AAA_PrkA TsaE AAA_25
Other DBs
NCBI-ProteinID: CAH20200
UniProt: Q66DT3
Position
1153708..1154979
AA seq 423 aa
MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVSPHRD
RSSLPTPHEIRHHLDDYVIGQEPAKKVLAVAVYNHYKRLRNGDTSNGIELGKSNILLIGP
TGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGI
VYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQGGRKHPQQEFLQVDT
SKILFICGGAFAGLDKVIGQRINTGSGIGFGAVVKGQSEKATEGELLSQVEPEDLIKFGL
IPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFSLEGVELEFRDEALTAIAK
KAMARKTGARGLRSIVEGVLLDTMYDLPSMDSVEKVVVDESVIAGQSAPMLIYGQPEAQA
SGE
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgacagataagcgcaaagacggttcaggaaagctgctgtattgctctttctgcggcaaa
agccagcatgaagtgcgtaagctaattgccgggccgtcagtgtatatctgcgatgaatgt
gtcgatttgtgtaatgacattattcgcgaagagattaaggaagtttccccgcaccgggat
cgcagttcactgccaacaccgcatgaaattcgccaccaccttgatgattatgtcatcggg
caggaacctgcgaaaaaagtgctggcagttgcggtgtataaccactacaagcgtctgcgt
aacggtgataccagtaatggtattgaactgggtaaaagtaatattttgctgattggtccg
acagggagcggtaaaacgctgttggcggaaacattggctcgcctcctggacgtgccattt
actatggcggacgcgactacgctgactgaagctggctatgtgggtgaagatgttgaaaac
atcattcagaagctactacagaagtgtgattacgacgtacagaaagcgcaacgtggtatc
gtctatatcgatgaaattgataaaatttcacgcaagtctgataatccgtcgatcacccgt
gatgtctcaggtgaaggcgtacagcaggctctgctgaaattgatcgaagggaccattgct
gcggtaccgccacaaggtggtcgtaagcatccacagcaggagtttttgcaggttgatacc
tccaagattctgtttatctgtggtggtgcttttgccggtttggacaaagttattgggcag
cgtattaataccggctcaggtatcggctttggcgcagtggtaaaaggccaatcagaaaag
gcaacagaaggtgagttgctgagtcaggttgagccagaagacctgatcaaatttggctta
atccctgaatttatcggtcgtttgccggtagtcgccacattgagcgaactgagtgaggac
gcactgatccagatccttaaagagccgaaaaatgcactgaccaagcaatatcaggcatta
ttcagccttgaaggtgttgaactcgagttccgtgacgaagcattgactgcgattgccaag
aaagcaatggcgcgtaaaacaggtgctcgtgggctgcgctccattgtcgaaggtgttttg
ctggatacgatgtatgatctgccatcaatggatagcgtagagaaggtggtcgtggatgaa
tcagttattgctggtcaatctgcgccgatgctgatttatggtcagcccgaagcgcaagct
tctggtgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (32)   
   Pfam (32)   
All databases (40)   

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