KEGG   Yersinia pestis PBM19: CH59_974
Entry
CH59_974          CDS       T03716                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ypw  Yersinia pestis PBM19
Pathway
ypw03410  Base excision repair
ypw03430  Mismatch repair
ypw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ypw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CH59_974 (recJ)
   03430 Mismatch repair
    CH59_974 (recJ)
   03440 Homologous recombination
    CH59_974 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ypw03400]
    CH59_974 (recJ)
DNA repair and recombination proteins [BR:ypw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     CH59_974 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CH59_974 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CH59_974 (recJ)
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB
Other DBs
NCBI-ProteinID: AJI90998
UniProt: A0A3G5L0J9
Position
1126807..1128540
AA seq 577 aa
MTLKTQLRRREAADDSHLPAQLPPLLRRLYASRGVKDAQELERGVKGLLAWQKLDGIDAG
VTLLQQALADRRRIVIVGDFDADGATSTALAVLALRSMGGSNLDYLVPNRFEDGYGLSPE
VVEQVAARGAELIVTVDNGISSHAGVDLAHAKGIQVLVTDHHLPGETLPAADAIINPNLA
GCDFLSKSLAGVGVTFYLMLALRARLRECGWFEQRTLAVPNLAELLDLVALGTVADVVPL
DANNRILVHQGLSRIRAGKCRPGIRALLEVANRDARQLVANDLGFSLGPRLNAAGRLDDM
SIGVALLLSDDIAQARALAIDLDTLNQTRREIEQGMQVEALQLCDQLERTSSELPYGIAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGEGLLKGSGRSVAGLHMRDALERLDTLNP
GLILKFGGHAMAAGLSLEEGKFDEFRQRFADLVGEWMDASQLEGVIWSDGELNGAELSLE
TAELLRDGGPWGQSFPEPTFDGKFRILQQRLVGERHLKLMVEPLNGGPLLDGIAFNVDTT
LWPDSSVREVKLAYKLDINEYRGNRSVQLLVQHLWPY
NT seq 1734 nt   +upstreamnt  +downstreamnt
gtgacgttgaaaacccaacttcgccgccgtgaggcggcagatgacagccatttacctgcg
caattgcccccgttactgcgtcgtctctatgctagccgtggcgtaaaggatgcgcaggag
ttggagaggggcgtgaaaggcctactggcatggcaaaaactggatggtattgacgctggc
gtcaccttattacaacaagccctggctgatcggcggcgtattgtcattgtcggcgatttt
gatgctgacggcgcgaccagtaccgcgttggcggtgctggctttgcgcagtatgggcggc
agtaaccttgattatctggtacctaaccgatttgaagatggttatgggcttagccccgaa
gtggttgaacaagttgcggccagaggggcagagctgattgttactgtggataacggtatt
tcctctcatgccggggtcgatctggctcatgccaaaggtattcaggttctggtgacggac
caccatttgccgggcgaaacattacccgcggcggatgccatcattaacccaaatctggcc
ggttgcgattttttatccaagtcattggcgggggtcggtgtcactttctatttgatgctg
gcgctgcgcgcccgtctcagggaatgtggttggtttgaacaacgtaccttagcggtccct
aatctggctgaactgttggatttggtggcattgggtacggtggcagatgtggtgccgttg
gatgccaataaccgtattttggtccatcaagggttaagtcgtattcgtgcggggaagtgc
cgtccaggaattcgcgcattattggaggtcgctaaccgtgatgcgcgtcaactggttgcg
aacgatttaggcttttctcttggcccacggttgaatgcggcggggcgtttagatgatatg
tccatcggggtggcgctactgctgagtgacgatattgctcaggcgcgagcactggcaatc
gatcttgacaccttgaatcaaacccggcgcgagatagaacagggtatgcaggttgaagct
ttgcaactgtgtgaccagttggagcgcaccagcagtgaattaccttacggtatcgcgatg
taccatccagaatggcatcagggcgttgtgggtattttggcttcacgcatcaaagaacgc
tttcaccgcccggttatcgcttttgccccggcgggagaagggttattgaaagggtcgggt
cgtagcgttgcgggtttgcatatgcgtgatgcccttgagcgtctggacactctgaaccca
gggttaatactgaagtttggtgggcacgccatggcggcagggttatcgctggaggaaggt
aaattcgatgaattccgccagcgttttgcagatttagtcggtgaatggatggatgcttcg
caattggaaggcgttatttggtctgatggcgaactgaacggtgctgagttatcactggag
accgcagagctattgcgcgacggtggtccatgggggcaatctttccctgagccgaccttt
gatggcaaattccgtatcttacagcagcgcttagtgggtgagcgtcacctgaaactcatg
gtagagccgctgaatggcgggcctttgttagatggaattgcctttaatgtcgataccact
ttgtggccggatagcagcgtgcgagaagttaaattggcctataaactggatattaatgaa
tatcgtggtaatcgcagtgttcagttgctggttcaacacttgtggccttattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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