KEGG T01833: YPD8

Yersinia pestis D182038: YPD8_3090

Entry

YPD8_3090 CDS T01833

Gene name

mdh

Definition

malate dehydrogenase

Orthology

K00024

malate dehydrogenase [EC:1.1.1.37]

Organism

ypx Yersinia pestis D182038

Pathway

ypx00020	Citrate cycle (TCA cycle)
ypx00620	Pyruvate metabolism
ypx00630	Glyoxylate and dicarboxylate metabolism
ypx00680	Methane metabolism
ypx01100	Metabolic pathways
ypx01110	Biosynthesis of secondary metabolites
ypx01120	Microbial metabolism in diverse environments

Module

ypx_M00009	Citrate cycle (TCA cycle, Krebs cycle)
ypx_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ypx_M00012	Glyoxylate cycle
ypx_M00168	CAM (Crassulacean acid metabolism), dark

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:ypx00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:ypx00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:ypx00630]
Metabolism; Energy metabolism; Methane metabolism [PATH:ypx00680]

SSDB

Motif

Pfam:

Ldh_1_N Ldh_1_C NAD_binding_10 Semialdhyde_dh

Other DBs

NCBI-GI:

384127541

NCBI-GeneID:

12096393

UniProt:

D0JS22

Position

complement(3901620..3902558)

AA seq 312 aa
MKVAVLGAAGGIGQALALLLKTQLPSGSDLSLYDIAPVTPGVAVDLSHIPTAVNIKGFSG
EDATPALQGADIVLISAGVARKPGMDRSDLFNVNAGIVRNLVEQIARTCPNALIGIITNP
VNTTVAIAAEVLKKAGVYDKNKLFGITTLDTIRSNTFVAELKGKQPQDIEVPVIGGHSGV
TILPLLSQIPGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVR
ALQGESNVVECSYVEGDGKYARFFAQPILLGKNGVAERKDIGKLSAFEQQALENMLDVLH
KDIELGEKFVNQ

NT seq 939 nt +upstreamnt +downstreamnt
atgaaagttgcagttctcggtgccgctggtgggattggccaggccctcgctcttctactc
aagacccagcttccttcaggttcagacctctctttatatgatatcgcgccagtaacgcct
ggtgttgctgttgatctgagccatatccctacagccgttaacattaaaggcttcagcggc
gaagatgctacaccagcccttcaaggggcagatattgtgctgatttctgctggtgtcgca
cgtaaacctggtatggatcgttcggatctgttcaacgtcaatgcgggcattgttcgtaat
ctggttgagcaaattgcacgtacttgcccgaacgcattgattggtatcatcactaaccca
gtcaacacaaccgtcgctattgcggctgaagtgctaaaaaaagcaggcgtttatgacaag
aataagctgtttggtattaccactctggataccattcgctccaatacctttgttgccgaa
ttaaaaggtaagcaaccccaggatatcgaagtgccggttattggtggccactctggtgtg
actatcttgccattgctatcacagatccctggcgttagctttacagaacaagaagttgca
gatttgaccaaacgtatccagaacgcgggtaccgaggttgtagaagctaaagccggtggc
gggtccgcgacgctgtctatggggcaagctgcggcacgttttggtctttctttggtacgt
gccctgcaaggtgaaagcaatgttgttgaatgctcttatgttgaaggcgatggcaaatat
gcccgcttctttgctcagcctattctactgggtaaaaacggtgtcgctgaacgtaaagat
atcggtaaactgagtgcttttgagcaacaagcgctggaaaatatgcttgatgttttacac
aaagatatcgagttaggtgagaagttcgttaatcaataa

All links

Pathway (11)   
   KEGG PATHWAY (7)   
   KEGG MODULE (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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