KEGG   Yersinia pseudotuberculosis YPIII: YPK_4152Help
Entry
YPK_4152          CDS       T00665                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ypy  Yersinia pseudotuberculosis YPIII
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ypy00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    YPK_4152
Enzymes [BR:ypy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     YPK_4152
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     YPK_4152
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(4584852..4585661)
Genome map
AA seq 269 aa AA seqDB search
MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILTLSDQPVLSVQRRAKYLL
LELPKGWIIIHLGMSGSLRVLSEETAAEKHDHVDLVVSNGKILRYTDPRRFGAWLWAKDL
ETSNVLAHLGPEPLSDEFTAQYLFDKSRNKRTLIKPWLMDNKVVVGVGNIYASESLFAAG
ILPDRAAGSLTDAESVLLVATIKAVLLHSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRA
GEPCRQCGHPIEIAKHGQRSTFFCRHCQH
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattaccagaagttgaaaccagccgccgcgggatcgaaccttatcttgtcggc
cagacaatcctttatgctgtggtcagaaatgcccgtttacgctggccggtatccgatgaa
attctaacacttagcgatcaacccgtactgagtgtccaacgccgggcgaagtatttactg
ctagagctgcctaaaggctggatcatcatacatttaggtatgtcaggtagcctgcgcgta
ttatctgaagagactgcagctgaaaagcacgatcatgtcgatttggtggtcagtaacgga
aaaatattgcgttataccgacccacgacgttttggtgcctggttgtgggcgaaagacctt
gagaccagtaatgtattagcccatttagggccagaaccactaagtgatgaatttactgcg
caatatctgttcgataaatcacgtaataaacgcacattgattaaaccgtggttgatggat
aacaaagtggtcgtcggagtgggtaacatttatgcgagcgaatcactgtttgctgctggg
attttgccagatcgtgccgcaggctcattgactgacgctgaatccgtattgctggtagca
acgataaaagccgtgttattgcattcgattgagcagggcggcaccacattacgtgatttt
ctgcagtcggatggtaaaccagggtatttcgcgcaagagttgcaggtctatgggcgtgcg
ggtgaaccatgtcggcagtgtgggcatcccattgaaatagcgaaacacgggcagcgcagc
acgttcttttgccgccactgccagcattga

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