KEGG T01210: YPZ3

Yersinia pestis Z176003: YPZ3_0929

Entry

YPZ3_0929 CDS T01210

Definition

exodeoxyribonuclease V subunit alpha

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

ypz Yersinia pestis Z176003

Pathway

ypz03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:ypz03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 AAA_19 Helicase_RecD Viral_helicase1 AAA_11 PhoH DUF2075 AAA_22 UvrD-helicase AAA_16 AAA_28 AAA_25 FtsK_SpoIIIE T2SE MukB CbiA AAA_17 SRP54 AAA Flavi_DEAD AAA_14 UvrD_C Herpes_Helicase NTPase_1

Other DBs

NCBI-GI:

294503039

NCBI-GeneID:

8990831

UniProt:

D5B358

Position

1208818..1210773

AA seq 651 aa
MTLLAQAARDRLLRPLDVQFSRMIAGDDDPRLQLAAAILSAEVGAGHVCLPLRYLQPELL
FGGRQPDLSLALWQAAGSPDKAQWLQALQNAPVVSDGSQPTPLVLQQERLYLQRMWQYEG
DVVQFIASDSVFINRDSDFMTSKGIATSVDESLLRETLDALFGCAGSEVDWQKVAAAVAA
TRRISVISGGPGTGKTTTVAKLLTALIRLSQGQRLRIKLAAPTGKAAARLTESLGKAIRQ
FFLTDDERKLFPDQASTLHRLLGVQPNSQRLRYHRGNPLNLDVLVVDEASMVDLPMMARL
IAALPAKAKVIFLGDRDQLASVEAGAVLGDICRFAELGYSEQRAQQLTQLTGYLLTNNAL
TSNVLTNKALANKAQPDETYSDSANVRDSLCLLRKSYRFDEKSGIGQLALAVNAGEYRQA
LSVLNSAYSDVERFPLADEEDYQVLLEACAVGYQHYLERVAALAPAAEVLAAFGRYQLLC
ALRSGPFGVSGLNERIEQVLHRKGFIIRPSGPSGRWYVGRPVMIELNDSALGLFNGDIGI
ALHDNEGELRVYFQLPDGNIKSVQPSRLPSHETAYAMTVHKSQGSEFEHTALVLPNTFMP
VLTRELVYTAITRARQHLTLYCSDAVLSHAIRTPTLRLSGLVDRLNTLNRQ

NT seq 1956 nt +upstreamnt +downstreamnt
atgacgctattggctcaggctgctcgagaccgcttattgcgcccactggatgtgcagttt
tcacgaatgattgccggcgatgatgacccgcgattacaactggccgcagcgatccttagt
gcagaagtaggggccggtcatgtttgcctgccattacgctatttacagccagaactgcta
ttcggtgggcggcaacccgatttatcactggcgctatggcaggcggcgggctcgccagat
aaagcacagtggctacaggcattacaaaacgccccagtagtcagtgatggctctcaacca
acaccattagtgctacagcaggaacgtttatatctgcaacgaatgtggcagtacgaagga
gatgtcgtccaatttattgccagtgactctgtttttataaacagagatagtgattttatg
accagtaaaggtattgccacttctgttgatgaatcgctattacgggagacgctagacgct
ttgtttggttgtgctggtagtgaggttgattggcaaaaagtggcggcagcggttgcggct
acccgtagaatttcagttatttccggcgggccgggcacggggaaaaccaccacagtagcc
aaacttttgacagcattgatacggcttagccaggggcaacgtttacgtattaaacttgcg
gccccaaccggtaaagccgctgcacgccttactgaatcactgggcaaagcgattcggcaa
ttctttcttactgatgatgaacgtaaattattccctgatcaggcttcgaccttgcaccgt
ttactgggtgttcagcccaatagccagcgcctgcgttaccaccgtggtaatccattaaat
cttgatgtactggtcgttgatgaagcatcaatggttgatttacctatgatggcgcgctta
attgcggcattacctgccaaggccaaggtgatattccttggtgaccgtgaccaactggcc
tcggttgaggcgggggcggttctgggggatatctgccgttttgccgaattaggttacagc
gagcaacgggcacagcaattaactcagttaacgggctatttattaactaataatgcatta
accagcaatgtactaaccaataaggcattagccaataaagcgcagccagatgaaacctat
tctgattcagcgaatgtacgcgatagcctgtgtttactgcgtaaaagttaccgcttcgat
gaaaagtcagggattgggcagcttgctctggccgttaatgcaggggagtatcggcaggct
ttatccgtattaaacagtgcgtattctgatgttgaacgcttcccgctggccgatgaggaa
gattatcaggtactgctagaggcttgtgctgtggggtatcagcattacctcgaacgggtg
gctgcgttagcccctgcggcagaggtattggcagcatttggccgctaccaactgctgtgt
gcattacgttccgggccattcggtgtcagtggcttaaacgaacgcattgaacaggtttta
catcgtaaaggattcattatccgtccatcagggccttctggccgttggtatgttgggcgg
ccagtgatgatagaacttaatgatagcgcacttggcttattcaacggggatattggtatt
gccttacatgataatgaaggcgagctacgggtatattttcaattgcccgatggcaatata
aagtcagtacaacctagtcgccttcccagccatgaaaccgcttatgctatgacggttcat
aaatcgcagggttcagagtttgaacacacagcattggtattacctaacacgttcatgccc
gtgttaactcgtgaattggtctataccgccattacccgcgcccgtcagcatctgacgctt
tattgcagcgatgccgtgctaagtcatgccatacgtacaccgactctccggctgagtggg
ctagttgatcgcttgaatacattaaatcgccaataa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (25)   
   Pfam (25)   
All databases (34)   

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