KEGG T01210: YPZ3

Yersinia pestis Z176003: YPZ3_3081

Entry

YPZ3_3081 CDS T01210

Gene name

pnp

Definition

polyribonucleotide nucleotidyltransferase

Orthology

K00962

polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]

Organism

ypz Yersinia pestis Z176003

Pathway

ypz00230	Purine metabolism
ypz00240	Pyrimidine metabolism
ypz03018	RNA degradation

Module

ypz_M00394

RNA degradosome

Class

Metabolism; Nucleotide metabolism; Purine metabolism [PATH:ypz00230]
Metabolism; Nucleotide metabolism; Pyrimidine metabolism [PATH:ypz00240]
Genetic Information Processing; Folding, sorting and degradation; RNA degradation [PATH:ypz03018]

SSDB

Motif

Pfam:

RNase_PH PNPase RNase_PH_C S1 KH_1 KH_3 KH_2 S1_2

Other DBs

NCBI-GI:

294505190

NCBI-GeneID:

8993031

UniProt:

D5B3J9

Position

complement(3949113..3951230)

AA seq 705 aa
MLTPIIRKFQYGQHTVTIETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDSFLNEVQVIATVVSV
NPQINPDIVALIGASAALSLSGIPFNGPIGAARVGFINDQYVLNPTTDELKESRLDLVVA
GTAGAVLMVESEADILSEEQMLGAVVFGHEQQQVVIENINALVAEAGKPKWDWQAEPVNE
ALHARVAELAEARLGDAYRITEKQERYTQVDAIKADVTEALLAQDDTLDAAEIQDILASV
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGILPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLLHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPSASE
FPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGVTALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIYTMKINPEKIKDVIGKGGSVIRALTDETGTTIEIEDDGTIKIAAT
DGDKAKHAIRRIEEITAEIEVGRIYAGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQDVPVKVMEVDRQGRIRLSIKEATTPDAEAPEAAAE

NT seq 2118 nt +upstreamnt +downstreamnt
ttgctgactccgattattcgtaaattccagtatggtcaacataccgtaactatcgaaact
ggtatgatggctcgccaggccactgcagccgtaatggtaagcatggacgacactgcagta
ttcgtgactgttgttggtcaaaagaaagccaaaccaggccagagtttcttccctctgacg
gttaactatcaggagcgtacttacgctgctggccgtatcccaggtagcttcttccgtcgt
gaaggccgcccaagtgaaggcgaaacactgacttcacgtctgatcgaccgcccaattcgc
ccactgttcccagacagcttcctgaacgaagttcaagtgattgcaaccgtcgtttcggtt
aacccacaaattaacccagacatcgtggcactgattggtgcatctgcggcactgagcttg
tcaggcattccatttaacggcccaatcggtgctgctcgcgttggttttatcaacgaccag
tatgtgctgaacccaaccactgacgagctgaaagagagccgtttggatctggttgttgcc
ggtactgcgggtgcagtgctgatggttgaatcagaagccgatattctgtccgaagagcaa
atgttgggcgcggtcgtcttcggccacgaacaacagcaagttgtgattgaaaatattaac
gctttggttgctgaagctggcaaacctaagtgggattggcaggcagagcctgtcaacgaa
gcactgcatgcgcgtgttgctgaactggccgaagcgcgtctgggcgatgcataccgtatc
actgaaaaacaagaacgttatacgcaagttgatgctatcaaagctgacgtgaccgaagcg
ctattagcgcaggacgacacattagatgccgctgaaattcaggatatcctggccagcgtt
gagaaaaatgttgtgcgtagccgtgtgctgcgtggtgagccacgtatcgatggtcgcgaa
aaagacatgatccgtggtttggatgtacgtactggcatcttgccacgtactcatggttct
gccttgttcacccgcggtgaaactcaggcgttggttaccgctacgctgggtacggcacgt
gacgcacaaaacattgatgagttgatgggtgagcgcacagattcattcctgttacactat
aatttccctccgtattgtgtaggcgaaacagggatggttggctcacctaagcgtcgtgag
attggccatggccgccttgcgaaacgtggtgttctggctgtgatgccaagtgcgagcgag
ttcccttacactattcgtgtggtttctgaaatcaccgagtctaatggttcttcctcaatg
gcttctgtttgtggtgcttctctggctctgatggatgcgggcgtgccaattaaagccgct
gttgctggtattgcaatgggcctggtaaaagagggtgataactttgtcgttctgtctgac
attctgggtgacgaagatcacttgggcgacatggactttaaagtagccggtagccgtgac
ggtgtgaccgcactgcaaatggacattaaaattgaaggtattacccgcgaaattatgcag
gtagctctgaatcaggctaagggtgcacgtttgcacattctgggcgtgatggaacaggct
atcagcacaccacgtggcgatatctctgagtttgctccacgtatctacaccatgaagatc
aaccctgagaaaatcaaggatgtgatcggtaaaggtggttcggtgatccgtgcgctgact
gatgaaactggcaccacgattgaaatcgaagatgatggtaccattaagattgcagcaact
gatggcgataaagcaaaacacgctatccgtcgtatcgaagagattactgctgaaatcgaa
gtgggccgtatttacgcaggtaaagtcacccgtatcgttgatttcggtgcatttgttgct
atcggtggcggtaaagaaggtctggtacatatttctcaaatcgctgataagcgtgtagag
aaagtgacagactacctgcagatgggtcaagatgtgccagttaaagtaatggaagttgat
cgtcagggccgtatccgcctgagcatcaaagaagccactactcctgacgcagaagcacca
gaagcagcagcagagtaa

All links

Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (30)   

Download RDF

DBGET integrated database retrieval system