KEGG T03611: BD65

Yersinia ruckeri YRB: BD65_2239

Entry

BD65_2239         CDS       T03611

Symbol

rsmB

Name

(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

yru Yersinia ruckeri YRB

Brite

KEGG Orthology (KO) [BR:yru00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:yru03009]
    BD65_2239 (rsmB)
Enzymes [BR:yru01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     BD65_2239 (rsmB)
Ribosome biogenesis [BR:yru03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    BD65_2239 (rsmB)

SSDB

Motif

Pfam:

Methyltr_RsmB-F NusB Methyltransf_31 FtsJ Methyltransf_25 Methyltransf_5 Cons_hypoth95 MTS Methyltr_RsmF_N Methyltransf_33 Methyltransf_12 Methyltransf_15 Ubie_methyltran RrnaAD Methyltransf_11 Met_10

Other DBs

NCBI-ProteinID:

AJI95630

Position

complement(2449468..2450757)

AA seq 429 aa
MKNTYNLRSIAAKAISQVLDKGQSLSTVLPGLQKSISDKDRALLQELCFGTLRVLPQLEW
CIQQLMTRPMTGKQRVFHYLIMVGLYQLLYTRIPPHAALAETVEGTVALKRPQLKGLVNG
VLRQFQRQQVDLLERAANNESRYLHPSWLLARIKKAYPDKWQQIIDANNQKPPMWLRVSR
LHYSRADYLELMKQAGIEAEPHTEYSDAVRLITPCAVNDLPGFTQGWVTVQDASAQGCVD
LLDPQNGEQILDLCAAPGGKTTHILEAAPKSHVLAVDIDEQRLSRVKENLQRLQLHATVT
VGDGRAPDKWCGNQLFDRILLDAPCSATGVIRRHPDIKWLRRDSDIAELAQLQSEILEAI
WPKLKKDGVMVYATCSILPEENQQQIANFLLRHPEARLVETGTPAQPGKQNLPHPEDGDG
FFYAKLIKG

NT seq 1290 nt +upstreamnt +downstreamnt
atgaaaaacacatataacctccgcagcatcgctgccaaagcaattagccaggtactggat
aaagggcaatccctcagtacagttttacctggtctccaaaagagtatttccgataaagac
cgtgcgttgctgcaggagttgtgttttggcactttacgcgttctcccacaacttgagtgg
tgcatccagcaattaatgacgcgtccaatgactggtaaacagcgagttttccattacctg
atcatggtcggtctctatcaattgctttatacccgaattccacctcacgcagcattggcg
gaaaccgtggaaggcacagttgcgttgaaacgcccacagctcaaagggctagtcaatggc
gtgttacgccaattccaacgacagcaggttgacctgctggaacgtgctgctaataacgag
agccgctatttgcacccaagctggttactggcacgaattaaaaaagcctatccagataaa
tggcaacagattattgatgccaataaccaaaaaccacccatgtggctacgcgttagccgt
cttcattattcacgtgcagattatcttgagttgatgaaacaggccggaattgaggctgaa
ccacacacggaatatagtgatgcagttcgtctgataacaccttgtgcggtgaacgatctt
cccggatttacccaaggttgggtaacggttcaggatgcttcggcgcaaggttgtgttgat
ctgctggatccgcagaatggagaacagatcctcgacttatgcgcagcacctggtgggaaa
actacacatattttggaggctgcgcctaaatctcatgtgctagccgtagatatcgatgaa
caacgtttaagtcgagtcaaagaaaacctgcagcgtcttcagctacacgccactgtaaca
gtgggtgatggccgcgctccggataaatggtgtggcaatcagttgttcgaccgaattctt
cttgatgcaccttgctcggcaaccggtgttattcgccgtcaccctgatatcaaatggcta
cgtcgcgacagcgatattgcggaacttgcgcagctacaatcagaaattcttgaagctatc
tggcctaaactgaaaaaagatggcgtgatggtttatgcaacctgctctattttgccagaa
gaaaaccagcaacagattgctaatttcctgctacgtcacccagaggctcgtttagtcgaa
accggtacgccagcccaacccggtaagcaaaatctgcctcatccggaagatggtgatggt
ttcttttacgctaagcttattaaaggttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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