KEGG   Yersinia ruckeri YRB: BD65_2666
Entry
BD65_2666         CDS       T03611                                 
Name
(GenBank) type III secretion outer membrane pore, YscC/HrcC family
  KO
K22504  type III secretion system outer membrane ring protein
Organism
yru  Yersinia ruckeri YRB
Brite
KEGG Orthology (KO) [BR:yru00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yru02044]
    BD65_2666
Secretion system [BR:yru02044]
 Type III secretion system
  Type III secretion core apparatus
   BD65_2666
SSDB
Motif
Pfam: Secretin T3S_SPI-1_N0 Secretin_N
Other DBs
NCBI-ProteinID: AJI94017
Position
2945246..2946958
AA seq 570 aa
MKGKPFVHIKIAMLLSTVALTGYVSSASGEILVAAPVAQEKSLDSFVANNVPIAKVFDAV
SSRLGKPIILSKTALQKKVTGNFDLSQPAEMFKSLARRTALVWYDDGASIYIYDNSEIRN
QLINTRSTSWNELINYLKTAGIYDSRFPVRSQNKSSVIYVSGPPIYVELVAAAAHYLDQQ
NQIQETAGRDVTVIPLKHSSVNDRVYTQRGQTITIPGMVSVINSLFEKGIPGNNITVVPR
GDAAENQIEEGFPKPPSVQNLTASNVGINRGENSDKFAVVAHPNSNSLLVTGSAEQTRYV
HQLVRALDSSRRQVELSLWIIDISKKKLDEVGVRWSIGDLKAGGGGIAFNQSTLSSSAKF
LARVDAISRTGDAQIVSRPIVLTQENIPALFDNNSSFYARLEGERVAKLEQVTYGTMVSV
LPRISQGDQVEMDVNIEDGSPGRAGGNDVDQIGGLPIVNRTNISTVARIAKDGSLLIGGY
TRDQLEESDEKIPLLGSIPYLGRLFSYRSSNQQKMIRVFLIQPRLLNESESWDGRQFSEK
DRLSDRIINKNEQLQASVKLLQTYMSRTWQ
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgaaaggtaagcctttcgtccacattaaaatagcgatgctactatctacagttgctctg
actggttacgtttcctctgcctcaggggaaattctggttgcagcaccggtcgctcaagaa
aaaagcctggattcgttcgtcgctaacaatgttccgatcgccaaggtatttgatgcggtc
tcatcccgattagggaaacctattattctcagcaaaactgcattgcagaagaaggtcacg
ggtaattttgatctctctcagccagctgaaatgttcaaatcgttggcccgccgtaccgcg
ttagtctggtatgacgatggagcaagtatttatatttacgataatagtgaaattcggaac
cagctaatcaacacccgttccaccagttggaatgaattgatcaattatcttaaaactgcg
ggaatttacgattctcggttccccgttcgttcacaaaataagagctcggtgatttatgta
tcgggtccaccgatatatgtagagctggttgctgctgctgctcactatcttgatcagcaa
aatcagatacaagaaaccgcgggtcgtgacgttacggttattccactgaaacattcatca
gtcaacgatcgtgtttacactcagcgtgggcagacaatcaccattccgggtatggtctca
gtgatcaattcattattcgagaaaggtattccgggtaataatatcaccgtagtgccacgc
ggagatgcagcggaaaatcaaatagaggaaggttttcccaaacctccttcagtacaaaac
ttaaccgctagtaacgtcggtataaatcgtggtgagaatagcgataaatttgcagtagtt
gcgcatccaaacagtaatagtttattggtgactggctctgcggagcaaactcgctatgta
catcaattggtgagagctttggactcttcgcgtcggcaggtagaactttcgctatggatc
attgatatttcgaagaaaaagctggatgaagttggggttcgttggagtatcggcgatctt
aaagcaggtggcggcgggattgcttttaaccaaagcaccttatcgagtagcgccaagttt
ttggctcgagttgatgcgataagtcgtaccggtgatgcacaaatagtgtctcgcccgatt
gtattgacccaagaaaatattcctgcgttattcgataataattcaagtttctatgctcgt
ctggagggtgagcgggtcgctaaacttgagcaagtgacatacggcactatggtcagcgta
ttaccgcgaatttctcaaggtgatcaggttgagatggacgttaatattgaggatggtagc
cctgggcgtgctggcggaaatgatgttgatcaaattggcggtttacccatcgtcaataga
accaatatcagcacggttgcacgtattgctaaagatggcagcctgcttattggtggttat
acacgcgatcagttagaagaaagtgatgaaaagattccgctgctaggtagcatcccttat
ttggggcgtttgtttagttatcgtagtagtaatcaacaaaaaatgatccgtgttttcctt
attcagccacgcttgttgaacgaatccgagagctgggatggtcggcagttctccgaaaaa
gatcgcttaagcgatcggataatcaataaaaatgagcagttgcaggcttcggtaaaatta
ctgcaaacctatatgagccgcacatggcaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

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