KEGG   Yersinia ruckeri YRB: BD65_3223
Entry
BD65_3223         CDS       T03611                                 
Symbol
clpA
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA
  KO
K03694  ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
yru  Yersinia ruckeri YRB
Brite
KEGG Orthology (KO) [BR:yru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:yru03110]
    BD65_3223 (clpA)
Chaperones and folding catalysts [BR:yru03110]
 Heat shock proteins
  HSP100
   BD65_3223 (clpA)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 Clp_N AAA_22 AAA_16 Sigma54_activat TniB ResIII AAA_7 AAA_14 RuvB_N nSTAND3 AAA_3 AAA_18 AAA_25 TIP49 IstB_IS21 AAA_6 TsaE bpMoxR NACHT
Other DBs
NCBI-ProteinID: AJI94549
Position
3543526..3545802
AA seq 758 aa
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPAAREALEACSVDLVALRQELEA
FIEQTTPTLPATEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVSGANVLVAIFSEQESQA
AYLLRKHDVSRLDVVNFISHGARKDEPGQAPNAENPVNEEPAGGEDRMENFTTNLNQLAR
VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMA
ECTLYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDKDSILFIDEIHTIIGAGAASGGQV
DAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIVEPTPEETVQIINGL
KPKYEAHHDVRYTAKAIRAAVELSVKYINDRHLPDKAIDVIDEAGARSRLMPASKRKKTV
NVSDIESVVARIARIPEKTVSASDRDVLRNLSSRLNMLVFGQDRAIEALTEAIKMSRAGL
GHENKPVGSFLFAGPTGVGKTEVTVQLAKALDIELLRFDMSEYMERHTVSRLIGAPPGYV
GYDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNVIL
VMTTNAGVRETQRTSIGFQRQDNSTDAMEEIKKVFTPEFRNRLDNIIWFNHLSTQVIQQV
VDKFIVELQAQLDAKGVSLEVSDDARNWLSEKGYDRAMGARPMTRVIQENLKKPLANELL
FGSLVDGGSVSVGLDKDKQQLAYEFQSAQKRKTEGAVH
NT seq 2277 nt   +upstreamnt  +downstreamnt
atgctcaatcaagaacttgaactcagccttaatatggctttcgccagagcgcgtgagcac
agacacgagtttatgaccgtggagcacctgttgctggcattactcagcaaccctgccgcg
agagaagcgctagaggcatgttcggttgatttggtggcgttacgccaagaactggaagcc
tttatcgaacaaaccacgccaacattaccggctaccgaggaagagcgagacacccaacct
acgctaagcttccagcgcgtactacaacgcgccgttttccatgttcagtcatccggtcgc
aatgaagtttccggcgcgaacgtactggttgccatctttagtgaacaagaatctcaggcg
gcttatctgctgcgtaaacacgatgtcagccgtttggatgtggtgaactttatttctcat
ggcgcgcgcaaagatgaaccgggtcaagcgcctaatgcagaaaatccggtgaatgaagaa
ccggcgggaggggaagatcgtatggagaacttcaccaccaatcttaaccaactggcgcgc
gttggtggcatcgacccgctgatcggtcgcgagaaagaactggaacgtgccattcaggtt
ctttgccgccgccgtaaaaataacccgctactggttggagaatctggcgtaggtaaaacc
gcgatagctgaaggtcttgcctggcgcattgtacagggcgatgtaccggaagtgatggcg
gaatgtacgctgtactcgctggatatcggttctttgctggccggaaccaagtatcgcggt
gatttcgagaaacgttttaaagcgctgctgaaacaactggagcaggataaagacagcatc
ctgtttattgatgaaatccacaccattatcggtgcgggtgccgcttccggcgggcaagtt
gatgcagccaatctgatcaaaccgttgctatccagcggaaaaattcgggttatcggttca
acgacctatcaggaattcagcaatatctttgagaaagatcgtgcgttagcacgtcgcttc
cagaaaattgatattgtggaaccgacgccagaagaaaccgtgcaaattatcaatggcttg
aaaccgaaatacgaagcgcaccacgatgttcgctataccgcaaaagccattcgagccgca
gtcgaactgtcggtgaaatatatcaatgatcgtcacttgccggataaagccattgacgtt
attgatgaagcgggcgctcgcagccgtttgatgccagccagcaaacgtaaaaaaacggtc
aacgtatcggatattgaatcggtggttgcacggattgcgcgtattccggagaaaaccgtt
tctgccagcgatcgtgatgttctgcgaaatctcagtagccgtctgaatatgctggtattc
gggcaggatagggcgattgaagctctgaccgaagctatcaagatgagccgtgctggtctg
ggtcatgagaacaagcccgtcggctccttcctgtttgctggtccgactggggtaggtaaa
acagaagtcacggtgcaactggctaaagctttggatatcgagctgttacgctttgatatg
tctgaatatatggaacgtcatacggtcagtcgcctgatcggtgcgcctccgggctacgtc
ggttacgatcagggtggcctgttgacggatgcggttatcaaacatcctcatgcggtattg
ttactggatgaaattgaaaaagcgcatccggatgtcttcaacctgctgttacaggtaatg
gataacggcacactaacggataacaatggacgcaaggctgattttcgcaatgtcattctc
gtgatgaccaccaatgctggtgtgcgggaaactcagcgtacctccattggtttccagcgc
caggacaacagcaccgacgcgatggaagaaatcaaaaaggtatttacgccagagtttcgt
aaccggttagataacattatttggttcaaccacttatcgactcaggttattcaacaggtc
gtcgacaagtttatcgtcgagttgcaggctcaattggatgccaaaggcgtttcactggaa
gtcagtgatgacgctcgtaattggttatctgaaaaaggctatgacagagccatgggggcg
cggccaatgacgcgggtgattcaggaaaacctgaaaaaaccgctggcaaatgaactgctg
tttggctcactggttgatggcggctctgtttctgtcggattggataaagataaacagcaa
ctggcttatgaattccaaagtgcgcaaaaacgtaaaacggaaggtgcggtacactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (24)   
   Pfam (24)   
All databases (30)   

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