KEGG   Yersinia similis: BF17_14035
Entry
BF17_14035        CDS       T03057                                 
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
ysi  Yersinia similis
Pathway
ysi00550  Peptidoglycan biosynthesis
ysi01100  Metabolic pathways
ysi01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:ysi00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    BF17_14035
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    BF17_14035
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ysi01011]
    BF17_14035
Enzymes [BR:ysi01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     BF17_14035
Peptidoglycan biosynthesis and degradation proteins [BR:ysi01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   BF17_14035
SSDB
Motif
Pfam: Transpeptidase PBP_dimer
Other DBs
NCBI-ProteinID: AHK20311
Position
complement(2980289..2982184)
AA seq 631 aa
MKKEPNPFRDYSAESALFVRRAVVAFLGILLLSGVLVANLYNLQIVRFDDYSTRSNDNRI
KLVPIAPSRGMIFDRNGTPLALNRTIYQLELMPEKIENLSATLNALRPIVDLTDDDIANF
EKERKRSRRFTSIAVKTPLTEVQVARFAVNQFHFPGIEVKGYQRRFYPYGSALTHVIGYV
SKINDKDVERLDKEGILPNYAATHDIGKLGIERYYESTLHGKTGYEEVEVNNRGRVIRQL
HEQPPQAGKDIYLTLDLSLQTYIEKLLSGSRAAVVVTDPRTGGILALVSNPSYDPNLFVD
GISNKDYQGLLNDTNRPLINRATQGVYPPASTVKPYIAVSALSAGVITKNTSLFDPGWWQ
LPGSEKRYRDWKKWGHGRLNITKALEESADTFFYQVAYDMGIDRLSSWMSKFGYGEYTGI
DLSEERAGLMPTREWKQKRHKKPWYQGDTIPVGIGQGYWTATPIQMAKALMTLINDGTVK
TPHLLQSTRIDGVLVPYKQKESTQIGSINSGYWEIAKDGMYGVANRSNGTGRKFFEGTPY
KAAAKSGTAQVYSYETYNASKVAEHLRDHKLMVAFAPYENPTVSVAIILENGGAGPAVGT
ITRQILDHILLGDNNTELPDAAPLPPGVEAD
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgaaaaaagaacctaacccttttcgcgactattcggctgaatcagccctgtttgtccgc
cgcgccgtagtggcttttctgggtatcctgctactgagcggggtactggttgctaacctc
tataatttgcaaatagtccgtttcgacgattacagcacccgctccaacgacaaccgcatc
aaactggttcctatcgctcctagccgtggcatgatatttgacagaaatggcacaccgctg
gcactaaaccgcaccatctatcaattagagttgatgccggaaaaaattgaaaacttgtca
gccaccctcaatgcactgcgtccaatagtggatctgactgacgacgatatcgctaacttt
gaaaaagagcgcaaacgctcacgtcgctttacctctattgcagttaaaacgccgctgacc
gaggtgcaagtcgcccgttttgcggtgaatcaattccacttccccggtattgaagtcaaa
ggctatcaacgccgcttctacccgtatggctccgccctgacccacgtgattggctacgtc
tccaaaattaacgataaagatgtcgagcggttggataaagaaggtattctccccaattat
gctgcgacccacgatatcggtaagttgggtattgaacgctattatgaatccacattacat
ggcaaaaccggttatgaagaagttgaagtcaataaccgaggccgggtaatccgccaatta
catgagcaaccgccacaggcaggtaaagatatttatctgactctcgatctgagtctgcaa
acctatattgagaagttactcagtggcagccgtgccgcagtcgtcgtcacagatccccgc
accggtgggatcctagccttggtatcaaacccaagctatgacccgaacctgtttgttgac
ggcatctccaacaaagattatcaagggttgcttaacgatacgaaccgcccattaatcaat
cgggcaacccaaggtgtttatccacctgcatcaaccgtgaaaccgtacattgcagtgtca
gcgctgagtgccggggttatcaccaaaaacaccagcctgttcgatcctggttggtggcaa
ctgcccggttcggaaaagcgctaccgtgactggaaaaaatggggtcatggccgcctgaat
atcaccaaagcactagaagaatcggcagataccttcttctaccaagtcgcctatgatatg
ggcattgaccgtttatcatcctggatgagtaaattcgggtacggtgaatatactggcatt
gatctatccgaagaacgtgctggtttaatgccaacacgcgagtggaagcaaaagcgccat
aagaagccttggtatcagggtgataccattccggtaggtattggccagggttattggact
gcgacaccaatccagatggctaaagccttaatgaccctgattaatgatggtacagtcaaa
acaccgcatctgttgcaaagcacccggattgatggcgtattagtgccctataagcagaaa
gagagcacgcagattggtagtatcaattctggctattgggaaattgctaaagacggtatg
tatggcgtagctaaccgctcgaacggtactggccgcaagttttttgaaggtacaccttat
aaggctgcggcgaagtcgggtaccgcacaggtttacagttatgaaacctataatgccagt
aaagtggcggaacacctgcgcgaccataagttaatggtcgcttttgcgccctatgagaac
cctacggtatccgttgcaataatattagaaaatggaggggcggggcctgcggtaggaacc
attacccgtcagatcctcgaccatatcttgctgggcgataataacactgaattaccggat
gcggctcctctgcctcctggtgttgaggcagattag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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