KEGG   Zobellella denitrificans: AN401_10135
Entry
AN401_10135       CDS       T05100                                 
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
zdf  Zobellella denitrificans
Brite
KEGG Orthology (KO) [BR:zdf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:zdf03009]
    AN401_10135 (rimO)
Enzymes [BR:zdf01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     AN401_10135 (rimO)
Ribosome biogenesis [BR:zdf03009]
 Prokaryotic type
  ribosomal protein modification factors
   AN401_10135 (rimO)
SSDB
Motif
Pfam: Radical_SAM TRAM_2 UPF0004 TRAM Methyltransf_2
Other DBs
NCBI-ProteinID: ATG74169
UniProt: A0A291HPY3
Position
2173825..2175138
AA seq 437 aa
MSVPRIGFVSLGCPKNLVDSERILTQLRIEGYDVVPSYDDADLVIVNTCGFIDSAVQESL
EAVGEALSENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLNHVHKYVPRPEYNP
FVSLVPEQGVKLTPKHFAYLKISEGCNHKCTFCIIPSMRGDLDSRPIGEVLSEARRLVDA
GVKELLVISQDTSAYGVDVKHKTGFADGMPVKTHIQALCEELGKMGVWVRLHYVYPYPHV
DDLIPLMRDGKILPYLDIPLQHASPRILKLMKRPGAVERTLERIRSWREICPEITIRSTF
IVGFPGETEEDFQLLLDFIEQAELDRVGCFTYSPVEGARANELADPVPEEVKQERFERFM
ALQQEISTRKLAQKVGKVIEVLIDEVDEEGAIGRSSADAPEIDGLVYLNGETELKPGDLV
KVTVTHSDEYDLWAEPV
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgtctgttccccgtatcggcttcgtgtccctcggttgcccgaaaaacctggtcgactcc
gagcgtatcctgacccagttgcgtatcgaaggctacgacgtggtgccttcctacgatgat
gccgatctggtgatcgtcaatacttgcggctttatcgacagcgccgtgcaggaatccctg
gaagcggtgggcgaagccctgagcgaaaacggcaaggtcatcgtcaccggctgcctgggc
gccaaggaagatcaaatccgtgaagtgcaccccaaggtgctggagatcaccggcccccac
tcctacgagcaggtgctgaaccatgtgcacaagtacgtgccgcgcccggagtacaacccc
ttcgtcagcctggtacccgagcagggcgtcaagctcacgcccaagcatttcgcctacctg
aagatctccgagggctgcaaccacaagtgcaccttctgcatcatcccctccatgcgcggc
gatctggacagccgccccatcggcgaggtgctgagtgaagcccgccgcctggtggacgcc
ggggtgaaggagctgctggtgatctcccaggacacctccgcctacggggtggacgtcaag
cacaagaccggcttcgccgatggcatgccggtcaagacccatatccaggctctgtgcgag
gagctcggcaagatgggggtctgggtacggctgcactatgtctacccctacccgcacgtg
gacgatctgatcccgctgatgcgcgacggcaagatactgccctacctggatatcccgctg
cagcacgccagcccccgcatcctgaaactgatgaagcgcccgggcgcggtggagcgcacc
ctggagcgcatccgcagctggcgcgagatctgccccgagatcaccatccgctccaccttt
atcgtgggctttccgggcgaaaccgaagaagacttccagctgctgctcgactttatcgag
caggccgagctggatcgggtcggctgcttcacctacagcccggtggaaggcgcccgcgcc
aacgagctggcggacccggtgccggaagaggtcaagcaggagcgcttcgaacgctttatg
gcgctgcagcaggagatttccacccgcaagctggcgcagaaggtgggcaaggtcatcgag
gtattgatcgacgaggtggacgaagaaggcgccatcggccgctccagcgccgacgccccg
gaaatcgacggcctggtctacctcaatggcgagaccgagctcaagcccggcgacctggtc
aaggtgaccgtcacccactccgacgaatacgatctctgggccgagccggtctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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