KEGG   Zobellia galactanivorans: ZOBELLIA_1723
Entry
ZOBELLIA_1723     CDS       T01586                                 
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime chain
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
zga  Zobellia galactanivorans
Pathway
zga03030  DNA replication
zga03430  Mismatch repair
zga03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:zga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ZOBELLIA_1723 (holB)
   03430 Mismatch repair
    ZOBELLIA_1723 (holB)
   03440 Homologous recombination
    ZOBELLIA_1723 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:zga03032]
    ZOBELLIA_1723 (holB)
   03400 DNA repair and recombination proteins [BR:zga03400]
    ZOBELLIA_1723 (holB)
Enzymes [BR:zga01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ZOBELLIA_1723 (holB)
DNA replication proteins [BR:zga03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ZOBELLIA_1723 (holB)
DNA repair and recombination proteins [BR:zga03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ZOBELLIA_1723 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 Vps23_core DUF1378
Other DBs
NCBI-ProteinID: CAZ95776
UniProt: G0LB47
Position
complement(2040387..2041538)
AA seq 383 aa
MLFNTILGLSHIKNHLATSADAGRIPHAQLFVGPEGSGTLPMAIAYAQYIICGNSGGEND
GSNESCNLKFGSLSHPDMHFAFPVSNSDKIKSHAVSDHYMEEWRKFVKEQPYGNLFDWYQ
LIGIEKKQGQIGVDEAQDVVKKLALKSYEGGYKVMLIWMAEKMNTAAANKLLKLIEEPPN
KTVFILIAEDEEQIIQTIRSRCQVLHFPPLAEEAMANALVEKGALREEALRIAHEANGNF
NKALDLMNSDSEDLVFEKWFVQWVRSAFKAKGNKSAIQDLIMWSEEVAKTGRETQKKFLL
YCLAVMRQAMLINFNADELAFMKVHVDGFSLEKFAPFIHENNIITITQELEDAIYHIERN
GNSKIILTDLSIKLTRLLHRKAA
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgctgttcaacactattttagggctatcgcacattaagaaccatttggccactagcgca
gatgctggccgaattccacatgcccaattattcgtagggcccgaaggctcgggaaccttg
cccatggccattgcctacgcccagtacatcatctgcggaaactcaggaggggaaaacgac
ggaagcaacgaaagttgcaacctaaaattcggttcgctttcgcatcccgatatgcacttc
gcctttccggtatcgaattccgacaagataaagagccatgccgtgagcgatcattatatg
gaagagtggcgcaaattcgtaaaagaacagccctatggcaaccttttcgattggtaccaa
ttgatcggtatagaaaaaaaacaaggccagatcggggttgacgaagcccaagatgtggtt
aaaaagctcgccttgaaatcgtacgaaggtgggtacaaggtcatgttgatctggatggcc
gaaaaaatgaataccgcggccgccaacaaactcttaaaattaatagaggaaccccccaat
aaaacggtttttatattgattgccgaagacgaagaacaaattatacagaccatacgttca
cgctgtcaagtattacattttcccccactggccgaagaggcaatggccaatgccctagtc
gaaaaaggcgccctaagggaagaagccttgcgtattgcccatgaggcaaacggcaacttt
aacaaggcccttgacctcatgaactccgactcagaagatttggtatttgaaaaatggttc
gtgcaatgggtacgtagcgcctttaaggcgaagggcaacaaaagtgccattcaagacctg
atcatgtggagcgaggaagtggcaaagaccgggcgcgagacccaaaagaaatttctactc
tattgccttgcggtaatgcgacaggccatgcttattaatttcaatgccgatgagcttgcc
tttatgaaggttcacgtagatggttttagccttgaaaaatttgctccctttattcacgaa
aacaatatcatcactattacacaggagttggaagacgccatatatcatattgaacgcaac
ggaaattccaagattatccttaccgacctatcgataaaattgacacgtcttttacacaga
aaagcggcctag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (49)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (62)   

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