Entry |
|
Name |
(RefSeq) ubiquitin receptor RAD23d
|
KO |
K10839 | UV excision repair protein RAD23 |
|
Organism |
zju Ziziphus jujuba (Chinese jujube)
|
Pathway |
zju04141 | Protein processing in endoplasmic reticulum |
|
Brite |
KEGG Orthology (KO) [BR:zju00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107416575
09124 Replication and repair
03420 Nucleotide excision repair
107416575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:zju03051]
107416575
03400 DNA repair and recombination proteins [BR:zju03400]
107416575
Proteasome [BR:zju03051]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
107416575
DNA repair and recombination proteins [BR:zju03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
107416575
|
SSDB |
|
Motif |
|
Other DBs |
|
Position |
4:complement(join(27036888..27037004,27037485..27037563,27037650..27037756,27037865..27037912,27037996..27038061,27038140..27038295,27038937..27039114,27039265..27039324,27039459..27039532,27040300..27040353,27040449..27040610,27041294..27041359))
|
AA seq |
388 aa
MKVFVKTLKGTNFEIEVKPEDLVVDVKKNIETVQGADVYPASQQMLIYQGKVLKDTTTLE
ENKVAENSFIVIMLSKTKVSPSGASGTSGAATSQAQPASTPTSTAPSTTSQVPPSAVVLP
QPAPQTAPTAAPTTAPTASPGSDVYGQAASNLVAGNNLESTIQQILDMGGGSWDRDTVVR
ALRAAFNNPERAVEYLYSGIPEQAEIPPVARVPTSGQATNPPPLNSPVQAPQPAAPAGGP
NSNPLDLFPQGLPNMGANAGAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPH
LMRLIQEHQADFLRLINEPAEGEGNLLGQLASAMPQAVSVTPEEREAIERLEAMGFDRAI
VLEVFFACNKNEELAANYLLDHMHEFEE |
NT seq |
1167 nt +upstreamnt +downstreamnt
atgaaggttttcgtgaagacactgaagggtactaacttcgagatcgaagtgaaacccgaa
gacttggttgttgatgtcaagaagaacatagagacagttcagggggcagatgtataccct
gcttctcaacagatgctcatttatcaggggaaagttcttaaggatacaacaactcttgaa
gaaaataaagttgctgaaaatagttttattgttatcatgttaagcaagactaaggtttcg
ccaagtggagcatcaggtacgtcaggcgctgcaacaagtcaggctcaacccgcaagtact
cctacctcaacagcaccatctacaacatctcaagttcccccctcagctgtagtgttgcca
cagcctgcccctcaaactgctcctactgcagctcctaccacagcccctactgcgtcccca
ggatctgatgtgtatggccaagctgcatcaaatcttgttgcaggaaataatttagagtct
accattcaacagattcttgatatgggtggaggaagttgggaccgggatactgttgttcgt
gctttacgtgctgcatttaacaaccctgaaagagctgtggaatatctgtattctggaatt
cctgaacaagctgaaattccaccggttgcccgagttcctacgagtgggcaggcaacaaat
cctccaccacttaattctcctgtacaggctccacagccagcagcgcctgctggtggtcct
aattcgaatccactggatctctttccgcagggccttccaaatatgggtgcaaatgctggt
gcaggcaccttggatttcctccgcaacagtcaacagttccaagcattgcgagctatggtg
caagcaaatccccaaatcctgcagcccatgcttcaggagctgggaaagcagaatccacat
ctaatgcggctcattcaagagcatcaagctgattttttacgcctcataaatgaacctgct
gagggagaagggaatctactgggtcagttggcttcggcaatgccacaggctgtgtctgtc
acccctgaggagcgagaagccattgaacgtcttgaagctatgggctttgatagagctata
gttttggaagtattctttgcatgcaacaagaatgaggagctggccgccaattatcttttg
gatcacatgcatgaatttgaagaatga |