KEGG   Ziziphus jujuba (Chinese jujube): 107416575
Entry
107416575         CDS       T04794                                 
Name
(RefSeq) ubiquitin receptor RAD23d
  KO
K10839  UV excision repair protein RAD23
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03420  Nucleotide excision repair
zju04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107416575
  09124 Replication and repair
   03420 Nucleotide excision repair
    107416575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:zju03051]
    107416575
   03400 DNA repair and recombination proteins [BR:zju03400]
    107416575
Proteasome [BR:zju03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    107416575
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      107416575
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD CUE Dsc3_N UBA_3 Rad60-SLD_2 DUF859
Other DBs
NCBI-GeneID: 107416575
NCBI-ProteinID: XP_015880567
UniProt: A0A6P3ZNL8
Position
4:complement(join(27036888..27037004,27037485..27037563,27037650..27037756,27037865..27037912,27037996..27038061,27038140..27038295,27038937..27039114,27039265..27039324,27039459..27039532,27040300..27040353,27040449..27040610,27041294..27041359))
AA seq 388 aa
MKVFVKTLKGTNFEIEVKPEDLVVDVKKNIETVQGADVYPASQQMLIYQGKVLKDTTTLE
ENKVAENSFIVIMLSKTKVSPSGASGTSGAATSQAQPASTPTSTAPSTTSQVPPSAVVLP
QPAPQTAPTAAPTTAPTASPGSDVYGQAASNLVAGNNLESTIQQILDMGGGSWDRDTVVR
ALRAAFNNPERAVEYLYSGIPEQAEIPPVARVPTSGQATNPPPLNSPVQAPQPAAPAGGP
NSNPLDLFPQGLPNMGANAGAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPH
LMRLIQEHQADFLRLINEPAEGEGNLLGQLASAMPQAVSVTPEEREAIERLEAMGFDRAI
VLEVFFACNKNEELAANYLLDHMHEFEE
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgaaggttttcgtgaagacactgaagggtactaacttcgagatcgaagtgaaacccgaa
gacttggttgttgatgtcaagaagaacatagagacagttcagggggcagatgtataccct
gcttctcaacagatgctcatttatcaggggaaagttcttaaggatacaacaactcttgaa
gaaaataaagttgctgaaaatagttttattgttatcatgttaagcaagactaaggtttcg
ccaagtggagcatcaggtacgtcaggcgctgcaacaagtcaggctcaacccgcaagtact
cctacctcaacagcaccatctacaacatctcaagttcccccctcagctgtagtgttgcca
cagcctgcccctcaaactgctcctactgcagctcctaccacagcccctactgcgtcccca
ggatctgatgtgtatggccaagctgcatcaaatcttgttgcaggaaataatttagagtct
accattcaacagattcttgatatgggtggaggaagttgggaccgggatactgttgttcgt
gctttacgtgctgcatttaacaaccctgaaagagctgtggaatatctgtattctggaatt
cctgaacaagctgaaattccaccggttgcccgagttcctacgagtgggcaggcaacaaat
cctccaccacttaattctcctgtacaggctccacagccagcagcgcctgctggtggtcct
aattcgaatccactggatctctttccgcagggccttccaaatatgggtgcaaatgctggt
gcaggcaccttggatttcctccgcaacagtcaacagttccaagcattgcgagctatggtg
caagcaaatccccaaatcctgcagcccatgcttcaggagctgggaaagcagaatccacat
ctaatgcggctcattcaagagcatcaagctgattttttacgcctcataaatgaacctgct
gagggagaagggaatctactgggtcagttggcttcggcaatgccacaggctgtgtctgtc
acccctgaggagcgagaagccattgaacgtcttgaagctatgggctttgatagagctata
gttttggaagtattctttgcatgcaacaagaatgaggagctggccgccaattatcttttg
gatcacatgcatgaatttgaagaatga

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