KEGG   Ziziphus jujuba (Chinese jujube): 107422504
Entry
107422504         CDS       T04794                                 
Symbol
EF1, EF1-alpha
Name
(RefSeq) elongation factor 1-alpha-like
  KO
K03231  elongation factor 1-alpha
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107422504 (EF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107422504 (EF1)
   03016 Transfer RNA biogenesis [BR:zju03016]
    107422504 (EF1)
   03012 Translation factors [BR:zju03012]
    107422504 (EF1)
   04131 Membrane trafficking [BR:zju04131]
    107422504 (EF1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zju04147]
    107422504 (EF1)
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     107422504 (EF1)
Transfer RNA biogenesis [BR:zju03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    107422504 (EF1)
Translation factors [BR:zju03012]
 Eukaryotic type
  Elongation factors
   107422504 (EF1)
Membrane trafficking [BR:zju04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    107422504 (EF1)
Exosome [BR:zju04147]
 Exosomal proteins
  Proteins found in most exosomes
   107422504 (EF1)
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 FlpD GTP_EFTU_D4 Semialdhyde_dhC SRPRB AAA_22
Other DBs
NCBI-GeneID: 107422504
NCBI-ProteinID: NP_001310804
UniProt: A0A0U4JLW5
Position
3:join(16113193..16113654,16114290..16115171)
AA seq 447 aa
MGKVKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPEKISFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGILKPGMVVTFAPSGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKVDRRSGKELEKEPKFLKNGDAGFVKMVPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPTGAKVTKSAAKKK
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgggtaaggtgaaggttcacattaacattgtggtcattggccatgtcgactccggtaag
tcgaccactactggtcatctcatctacaagcttgggggtattgacaagcgtgttattgag
aggttcgagaaggaagctgctgagatgaacaagaggtcattcaagtatgcctgggtgctt
gacaagctcaaggctgagcgtgaacgtggtattaccattgatattgccttgtggaagttt
gagaccaccaagtactactgcactgtcattgatgctcctggacatcgtgactttattaag
aacatgattactggaacatcacaggctgactgtgctgttctcatcattgactccaccact
ggtggttttgaagctggtatttccaaggatggtcagacccgtgagcatgcattgctcgct
ttcactcttggtgtcaagcagatgatctgctgctgcaacaagatggatgccacaaccccc
aagtactcgaaggctaggtatgatgaaattgtgaaggaagtttcttcatacttgaagaag
gttggctacaaccctgagaagatctcatttgttccgatctctggttttgagggtgacaac
atgattgagaggtctaccaaccttgactggtacaagggtccaaccctccttgaagcactt
gaccagattaatgagccaaagaggccctcagacaagccacttcgtctcccacttcaggat
gtttacaagattggtggtattggaactgtcccagttggtcgtgtggagactggtatcctc
aagcctggtatggttgtgacctttgccccaagtggactcaccactgaagttaagtctgtt
gaaatgcatcatgaagctcttcaagaggccttgcctggtgacaatgttgggttcaacgtt
aagaatgttgctgtgaaggatcttaagcgtggttatgttgcatccaattctaaggatgat
cctgccaaggaggcagccaacttcacatcccaggtcattatcatgaaccaccctggtcag
attggtaatggatatgccccagtgcttgactgccacacctcccacattgctgtcaagttt
gctgaaatcttgaccaaggttgataggaggtctggtaaggagcttgagaaggagcctaag
tttttgaagaatggtgatgctggctttgttaagatggttcccaccaagcctatggttgtt
gagactttctctgagtacccaccactaggtcggtttgctgttcgtgacatgcgccagacg
gttgctgttggagttatcaagagtgttgagaagaaggatcctactggtgctaaggttacc
aagtctgctgccaagaagaagtga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (50)   

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