KEGG   Ziziphus jujuba (Chinese jujube): 107423562
Entry
107423562         CDS       T04794                                 
Name
(RefSeq) DNA-directed RNA polymerases II and V subunit 8A
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03020  RNA polymerase
zju03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107423562
  09124 Replication and repair
   03420 Nucleotide excision repair
    107423562
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zju03021]
    107423562
   03400 DNA repair and recombination proteins [BR:zju03400]
    107423562
Transcription machinery [BR:zju03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     107423562
  RNA polymerase III system
   RNA polymerase III
     107423562
  RNA polymerase I system
   RNA polymerase I
     107423562
DNA repair and recombination proteins [BR:zju03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107423562
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG Salt_tol_Pase
Other DBs
NCBI-GeneID: 107423562
NCBI-ProteinID: XP_048333846
Position
3:join(32041445..32041520,32041750..32041907,32042456..32042550,32042647..32042761)
AA seq 147 aa
MMAGILFDDIFTIEILNPNGEKFDKVTRIAAQSEKHGILMNLDVNTEIYPMKKKEKFLMV
LSPTLNWNEAFSSSDDTQGEQKSLADKFEYVMHGLVYKISEEGSGSDVKAGIYASFGGLQ
MWLKGDPIHCTKFKVDQKLFLLIRKLP
NT seq 444 nt   +upstreamnt  +downstreamnt
atgatggctggcatcctttttgatgacatttttacaattgagattctaaacccgaacggt
gaaaaatttgataaagttactaggattgcagcacaaagtgaaaagcatgggatattgatg
aatctagatgtaaatactgagatatatccgatgaagaaaaaagagaaattcttgatggta
ttgtcacccacacttaattggaatgaagcattttcctccagtgatgatacgcagggcgag
cagaagtctcttgcagacaaatttgaatatgtcatgcatggattggtgtataaaatatca
gaagaaggttcaggatctgacgtcaaagcgggaatatatgcttcatttggtggacttcag
atgtggctgaagggggatccaatccattgtaccaagtttaaggttgatcaaaagttgttt
cttcttattaggaagctgccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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